Molecular crowding reduces to a similar extent the diffusion of small solutes and macromolecules: measurement by fluorescence correlation spectroscopy

被引:115
作者
Dauty, E
Verkman, AS
机构
[1] Univ Calif San Francisco, Cardiovasc Res Inst, Dept Med, San Francisco, CA 94143 USA
[2] Univ Calif San Francisco, Cardiovasc Res Inst, Dept Physiol, San Francisco, CA 94143 USA
关键词
macromolecular crowding; diffusion; fluorescence correlation spectroscopy; Ficoll-70; viscosity;
D O I
10.1002/jmr.709
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Aqueous environments in living cells are crowded, with up to >50 wt% small and macromolecule-size solutes. We investigated quantitatively one important consequence of molecular crowding-reduced diffusion of biologically important solutes. Fluorescence correlation spectroscopy (FCS) was used to measure the diffusion of a series of fluorescent small solutes and macromolecules. In water, diffusion coefficients (D-w(o)) were (in cm(2)/s X 10(-8)): rhodamine green (270), albumin (52), dextrans (75, 10 kDa; 10, 500 kDa), double-stranded DNAs (96, 20 bp; 10, 1 kb; 3.4, 4.5 kb) and polystyrene nanospheres (5.4, 20 nm w diameter; 2.3, 100 nm). Aqueous-phase diffusion (D-w) in solutions crowded with Ficoll-70 (0-60 wt%) was reduced by up to 650-fold in an exponential manner: D-w=D(w)(o)exp(-[C]/[C](exp)), where [C](exp) is the W concentration (in wt%) of crowding agent reducing Do by 63%. FCS data for all solutes and Ficoll-70 W concentrations fitted well to a model of single-component, simple (non-anomalous) diffusion. Interestingly [C](exp) were nearly identical (11 +/- 2 wt%, SD) for diffusion of the very different types of macromolecules in Ficoll-70 solutions. However, [C](exp) was dependent on the nature of the crowding agent: for example, [C](exp) for diffusion of rhodamine green was 30 wt% for glycerol and 16 wt% for 500 kDa dextran. Our results indicate that molecular crowding can greatly reduce aqueous-phase diffusion of biologically important macromolecules, and demonstrate a previously unrecognized insensitivity of crowding effects on the size and characteristics of the diffusing species. Copyright (C) 2004 John Wiley Sons, Ltd.
引用
收藏
页码:441 / 447
页数:7
相关论文
共 37 条
[1]   2-PHOTON FLUORESCENCE CORRELATION SPECTROSCOPY - METHOD AND APPLICATION TO THE INTRACELLULAR ENVIRONMENT [J].
BERLAND, KM ;
SO, PTC ;
GRATTON, E .
BIOPHYSICAL JOURNAL, 1995, 68 (02) :694-701
[2]   Diffusion of green fluorescent protein in the aqueous-phase lumen of endoplasmic reticulum [J].
Dayel, MJ ;
Hom, EFY ;
Verkman, AS .
BIOPHYSICAL JOURNAL, 1999, 76 (05) :2843-2851
[3]   Macromolecular crowding: an important but neglected aspect of the intracellular environment [J].
Ellis, RJ .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2001, 11 (01) :114-119
[4]   HOW CROWDED IS THE CYTOPLASM [J].
FULTON, AB .
CELL, 1982, 30 (02) :345-347
[5]   LOW VISCOSITY IN THE AQUEOUS DOMAIN OF CELL CYTOPLASM MEASURED BY PICOSECOND POLARIZATION MICROFLUORIMETRY [J].
FUSHIMI, K ;
VERKMAN, AS .
JOURNAL OF CELL BIOLOGY, 1991, 112 (04) :719-725
[6]   Prospects of electron cryotomography to visualize macromolecular complexes inside cellular compartments:: implications of crowding [J].
Grünewald, K ;
Medalia, O ;
Gross, A ;
Steven, AC ;
Baumeister, W .
BIOPHYSICAL CHEMISTRY, 2003, 100 (1-3) :577-591
[7]   Diffusion of tricarboxylic acid cycle enzymes in the mitochondrial matrix in vivo -: Evidence for restricted mobility of a multienzyme complex [J].
Haggie, PM ;
Verkman, AS .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (43) :40782-40788
[8]   Macromolecular crowding: qualitative and semiquantitative successes, quantitative challenges [J].
Hall, D ;
Minton, AP .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2003, 1649 (02) :127-139
[9]   MACROMOLECULAR DIFFUSION IN CROWDED SOLUTIONS [J].
HAN, JN ;
HERZFELD, J .
BIOPHYSICAL JOURNAL, 1993, 65 (03) :1155-1161
[10]   Biological and chemical applications of fluorescence correlation spectroscopy: A review [J].
Hess, ST ;
Huang, SH ;
Heikal, AA ;
Webb, WW .
BIOCHEMISTRY, 2002, 41 (03) :697-705