The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

被引:306
作者
Liolios, Konstantinos [1 ]
Chen, I-Min A. [2 ]
Mavromatis, Konstantinos [1 ]
Tavernarakis, Nektarios [3 ]
Hugenholtz, Philip [4 ]
Markowitz, Victor M. [2 ]
Kyrpides, Nikos C. [1 ]
机构
[1] DOE Joint Genome Inst, Genome Biol Program, Walnut Creek, CA USA
[2] Univ Calif Berkeley, Lawrence Berkeley Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA
[3] Fdn Res & Technol, Inst Mol Biol & Biotechnol, Iraklion, Crete, Greece
[4] DOE Joint Genome Inst, Microbial Ecol Program, Walnut Creek, CA USA
关键词
SYSTEM; INFORMATION; MONITOR;
D O I
10.1093/nar/gkp848
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Genomes On Line Database (GOLD) is a comprehensive resource for centralized monitoring of genome and metagenome projects worldwide. Both complete and ongoing projects, along with their associated metadata, can be accessed in GOLD through precomputed tables and a search page. As of September 2009, GOLD contains information for more than 5800 sequencing projects, of which 1100 have been completed and their sequence data deposited in a public repository. GOLD continues to expand, moving toward the goal of providing the most comprehensive repository of metadata information related to the projects and their organisms/environments in accordance with the Minimum Information about a (Meta) Genome Sequence (MIGS/MIMS) specification. GOLD is available at: http://www.genomesonline.org and has a mirror site at the Institute of Molecular Biology and Biotechnology, Crete, Greece, at: http://gold.imbb.forth.gr/
引用
收藏
页码:D346 / D354
页数:9
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