The use of competitive PCR for quantitation of HSV-1 DNA

被引:7
作者
Kosaki, R
Nakamura, T
Higaki, S
Yamamoto, S
Inoue, Y
Hayashi, K
Shimomura, Y
Tano, Y
机构
[1] Osaka Univ, Sch Med, Dept Ophthalmol, Suita, Osaka 5650871, Japan
[2] Kobe Inst Hlth, Kobe, Hyogo, Japan
[3] Kinki Univ, Sch Med, Dept Ophthalmol, Osaka 589, Japan
关键词
competitive PCR; cornea; glycoprotein D; herpes simplex virus type-1; human;
D O I
10.1016/S0021-5155(03)00010-8
中图分类号
R77 [眼科学];
学科分类号
100212 ;
摘要
Purpose: Polymerase chain reaction (PCR) detects the genomic materials of etiological agents with high specificity and sensitivity. However, in herpes simplex virus type 1 (HSV-1) infection, the clinical significance of the results often poses controversy because of the subclinical viral shedding during latent infection. Quantitative PCR might provide additional information to help clinical evaluation of the results. Methods: Virus DNA was extracted from high titer stock of human HSV-1 (FK 25) by phenol/chloroform treatment. Construct (p/HSV-1) was made by inserting the glycoprotein D gene obtained from virus DNA into p(GEM-T) vector. Competitor (p/DeltaHSV-1) was made by deleting the inner 40 bp of construct (p/HSV-1) with restriction enzyme. Competitive PCR was performed using primers that amplify the glycoprotein D gene, and a template made of a 1:1 molar mixture of HSV-1 DNA and the competitor. Results: The PCR product reflected the initial template dose from 20 to 30 cycles. Minimum detection level of HSV-1 DNA was 0.01 ng. Conclusion: Competitive PCR can quantitate HSV-1 DNA. (C) 2003 Japanese Ophthalmological Society.
引用
收藏
页码:240 / 245
页数:6
相关论文
共 25 条
[1]   ABSOLUTE MESSENGER-RNA QUANTIFICATION USING THE POLYMERASE CHAIN-REACTION (PCR) - A NOVEL-APPROACH BY A PCR AIDED TRANSCRIPT TITRATION ASSAY (PATTY) [J].
BECKERANDRE, M ;
HAHLBROCK, K .
NUCLEIC ACIDS RESEARCH, 1989, 17 (22) :9437-9446
[2]   ENZYME IMMUNOFILTRATION TECHNIQUE FOR RAPID DIAGNOSIS OF HERPES-SIMPLEX VIRUS EYE INFECTIONS IN A RABBIT MODEL [J].
CLEVELAND, PH ;
RICHMAN, DD ;
REDFIELD, DC ;
DISHAROON, DR ;
BINDER, PS ;
OXMAN, MN .
JOURNAL OF CLINICAL MICROBIOLOGY, 1982, 16 (04) :676-685
[3]  
DAWSON C R, 1976, Survey of Ophthalmology, V21, P121, DOI 10.1016/0039-6257(76)90090-4
[4]   Application of competitive PCR to cerebrospinal fluid samples from patients with herpes simplex encephalitis [J].
Domingues, RB ;
Lakeman, FD ;
Mayo, MS ;
Whitley, RJ .
JOURNAL OF CLINICAL MICROBIOLOGY, 1998, 36 (08) :2229-2234
[5]   ANALYSIS OF CYTOKINE MESSENGER-RNA AND DNA - DETECTION AND QUANTITATION BY COMPETITIVE POLYMERASE CHAIN-REACTION [J].
GILLILAND, G ;
PERRIN, S ;
BLANCHARD, K ;
BUNN, HF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (07) :2725-2729
[6]   Real time quantitative PCR [J].
Heid, CA ;
Stevens, J ;
Livak, KJ ;
Williams, PM .
GENOME RESEARCH, 1996, 6 (10) :986-994
[7]   Evaluation of a quantitative competitive PCR assay for measuring herpes simplex virus DNA content in genital tract secretions [J].
Hobson, A ;
Wald, A ;
Wright, N ;
Corey, L .
JOURNAL OF CLINICAL MICROBIOLOGY, 1997, 35 (03) :548-552
[8]   A new ultrasensitive assay for quantitation of HIV-1 RNA in plasma [J].
Johanson, J ;
Abravaya, K ;
Caminiti, W ;
Erickson, D ;
Flanders, R ;
Leckie, G ;
Marshall, E ;
Mullen, C ;
Ohhashi, Y ;
Perry, R ;
Ricci, J ;
Salituro, J ;
Smith, A ;
Tang, N ;
Vi, M ;
Robinson, J .
JOURNAL OF VIROLOGICAL METHODS, 2001, 95 (1-2) :81-92
[9]   QUANTITATION OF HEPATITIS-C VIRUS-RNA BY COMPETITIVE POLYMERASE CHAIN-REACTION [J].
KANEKO, S ;
MURAKAMI, S ;
UNOURA, M ;
KOBAYASHI, K .
JOURNAL OF MEDICAL VIROLOGY, 1992, 37 (04) :278-282
[10]   SYBR-GREEN-I DNA STAINING INCREASES THE DETECTION SENSITIVITY OF VIRUSES BY POLYMERASE CHAIN-REACTION [J].
KARLSEN, F ;
STEEN, HB ;
NESLAND, JM .
JOURNAL OF VIROLOGICAL METHODS, 1995, 55 (01) :153-156