Toward understanding mobile proton behavior from first principles calculation: The short hydrogen bond in crystalline urea-phosphoric acid

被引:41
作者
Morrison, CA
Siddick, MM
Camp, PJ
Wilson, CC
机构
[1] Univ Edinburgh, Sch Chem, Edinburgh EH9 3JJ, Midlothian, Scotland
[2] Univ Glasgow, Dept Chem, Glasgow G12 8QQ, Lanark, Scotland
基金
英国工程与自然科学研究理事会;
关键词
D O I
10.1021/ja043327z
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The dynamics of the intermolecular short hydrogen bond in the molecular complex of urea and phosphoric acid are investigated using plane-wave density functional theory. Results indicate migration of the proton toward the center of the hydrogen bond as temperature is increased, in line with recent experimental measurements. Computed vibrational frequencies show favorable agreement with experimental measurement. An analysis of existing neutron diffraction data leads us to conclude that the effective potential well experienced by the proton is temperature-dependent. Inspired by our computations and theoretical analysis, we offer a possible explanation for the proton migration phenomenon.
引用
收藏
页码:4042 / 4048
页数:7
相关论文
共 18 条
[1]  
Allen M. P., 2017, Computer Simulation of Liquids, VSecond, DOI [10.1093/oso/9780198803195.001.0001, DOI 10.1093/OSO/9780198803195.001.0001]
[2]  
Chaikin P M., 1997, Principles of Condensed Matter Physics
[3]   Structure and dynamics of the symmetric hydrogen bond in potassium hydrogen maleate: a neutron scattering study [J].
Fillaux, F ;
Leygue, N ;
Tomkinson, J ;
Cousson, A ;
Paulus, W .
CHEMICAL PHYSICS, 1999, 244 (2-3) :387-403
[4]   THE ROLE OF SHORT HYDROGEN-BONDS IN MECHANISMS OF ENZYMATIC ACTION [J].
GOLUBEV, NS ;
DENISOV, GS ;
GINDIN, VA ;
LIGAY, SS ;
LIMBACH, HH ;
SMIRNOV, SN .
JOURNAL OF MOLECULAR STRUCTURE, 1994, 322 :83-91
[5]   DIODE-LASER SPECTROSCOPY OF THE NU-3 AND NU-2 BANDS OF FHF- IN 1300 CM-1 REGION [J].
KAWAGUCHI, K ;
HIROTA, E .
JOURNAL OF CHEMICAL PHYSICS, 1987, 87 (12) :6838-6841
[6]   Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set [J].
Kresse, G ;
Furthmuller, J .
PHYSICAL REVIEW B, 1996, 54 (16) :11169-11186
[7]  
LICZYSZYN MM, 1992, J RAMAN SPECTROSC, V23, P1
[8]   Crystal engineering based on short hydrogen bonds; Cocrystallization of a highly nonlinear optical merocyanine dye with nitrophenol derivatives [J].
Pan, F ;
Wong, MS ;
Gramlich, V ;
Bosshard, C ;
Gunter, P .
CHEMICAL COMMUNICATIONS, 1996, (13) :1557-1558
[9]   From the isolated molecule to oligomers and the crystal:: A static density functional theory and Car-Parrinello molecular dynamics study of geometry and potential function modifications of the short intramolecular hydrogen bond in picolinic acid N-oxide [J].
Panek, J ;
Stare, J ;
Hadzi, D .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (36) :7417-7423
[10]   Proton dynamics in an enzyme model substrate: an ab initio molecular dynamics study [J].
Pantano, S ;
Alber, F ;
Carloni, P .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2000, 530 (1-2) :177-181