Thermodynamic parameters for the association of fluorinated benzenesulfonamides with bovine carbonic anhydrase II

被引:47
作者
Krishnamurthy, Vijay M.
Bohall, Brooks R.
Kim, Chu-Young
Moustakas, Demetri T.
Christianson, David W.
Whitesides, George M.
机构
[1] Harvard Univ, Dept Chem & Biol Chem, Cambridge, MA 02138 USA
[2] Univ Penn, Dept Chem, Roy & Diana Vagelos Labs, Philadelphia, PA 19104 USA
关键词
calorimetry; fluorinated ligands; ligand design; rational drug design; structure-activity relationships;
D O I
10.1002/asia.200600360
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
This paper describes a calorimetric study of the association of a series of seven fluorinated benzenesulfonamide ligands (C6HnF5-nSO2NH2) with bovine carbonic anhydrase II (BCA). Quantitative structure-activity relationships between the free energy, enthalpy, and entropy of binding and pK(a) and logP of the ligands allowed the evaluation of the thermodynamic parameters in terms of the two independent effects of fluorination on the ligand: its electrostatic potential and its hydrophobicity. The parameters were partitioned to the three different structural interactions between the ligand and BCA: the Zn-II cofactor-sulfonamide bond ( approximate to 65% of the free energy of binding), the hydrogen bonds between the ligand and BCA (approximate to 10%), and the contacts between the phenyl ring of the ligand and BCA (approximate to 25%). Calorimetry revealed that all of the ligands studied bind in a 1:1 stoichiometry with BCA; this result was confirmed by (FNMR)-F-19 spectroscopy and X-ray crystallography (for complexes with human carbonic anhydrase II).
引用
收藏
页码:94 / 105
页数:12
相关论文
共 85 条
  • [1] BATTAGLIA MR, 1981, CHEM PHYS LETT, V78, P420
  • [2] BINFORD JS, 1974, BIOCHIM BIOPHYS ACTA, V341, P345, DOI 10.1016/0005-2744(74)90227-7
  • [3] Fluorine in medicinal chemistry
    Böhm, HJ
    Banner, D
    Bendels, S
    Kansy, M
    Kuhn, B
    Müller, K
    Obst-Sander, U
    Stahl, M
    [J]. CHEMBIOCHEM, 2004, 5 (05) : 637 - 643
  • [4] CRYSTALLOGRAPHIC R-FACTOR REFINEMENT BY MOLECULAR-DYNAMICS
    BRUNGER, AT
    KURIYAN, J
    KARPLUS, M
    [J]. SCIENCE, 1987, 235 (4787) : 458 - 460
  • [5] MAPPING PROTEIN-PEPTIDE AFFINITY - BINDING OF PEPTIDYLSULFONAMIDE INHIBITORS TO HUMAN CARBONIC-ANHYDRASE-II
    BUNN, AMC
    ALEXANDER, RS
    CHRISTIANSON, DW
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1994, 116 (12) : 5063 - 5068
  • [6] CHEN RF, 1967, J BIOL CHEM, V242, P5813
  • [7] Carbonic anhydrase: Evolution of the zinc binding site by nature and by design
    Christianson, DW
    Fierke, CA
    [J]. ACCOUNTS OF CHEMICAL RESEARCH, 1996, 29 (07) : 331 - 339
  • [8] Clare BW, 2004, CRC ENZYM INHIB SER, P149, DOI 10.1201/9780203475300.ch5
  • [9] CHEMICAL-REACTIONS OF SULFONAMIDES WITH CARBONIC-ANHYDRASE
    COLEMAN, JE
    [J]. ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY, 1975, 15 : 221 - 242
  • [10] Affinity capillary electrophoresis: A physical-organic tool for studying interactions in biomolecular recognition
    Colton, IJ
    Carbeck, JD
    Rao, J
    Whitesides, GM
    [J]. ELECTROPHORESIS, 1998, 19 (03) : 367 - 382