Structural and functional characterization of H+,K+-ATPase with bound fluorinated phosphate analogs

被引:16
作者
Abe, Kazuhiro [1 ]
Tani, Kazutoshi [1 ]
Fujiyoshi, Yoshinori [1 ]
机构
[1] Kyoto Univ, Fac Sci, Dept Biophys, Sakyo Ku, Kyoto 6060852, Japan
关键词
P-type ATPase; H+; K+-ATPase; Two-dimensional crystal; Cryo-electron microscopy; Membrane protein structure; SARCOPLASMIC-RETICULUM CA2+-ATPASE; SODIUM-POTASSIUM PUMP; P-TYPE ATPASES; CALCIUM-PUMP; BETA-SUBUNIT; GASTRIC H+; K+-ATPASE; CRYSTAL-STRUCTURE; TRANSPORT CYCLE; ION-TRANSPORT; RESOLUTION;
D O I
10.1016/j.jsb.2009.12.008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Gastric H+,K+-ATPase is responsible for gastric acid secretion. In order to characterize the phosphorylation events on H+,K+-ATPase, the properties of fluorinated phosphate analogs [XFs, e.g. aluminum fluoride (AlF), beryllium fluoride (BeF) and magnesium fluoride (MgF)], and the structural differences induced by XFs were investigated. The addition of divalent cations to the XF-inhibited H+,K+-ATPase restores the activity of the AlF- or MgF-inhibited, but not of the BeF-inhibited enzyme, although limited trypsin digestion reveals that they assume the same E2P-like state. To clarify the conformational differences induced by XFs, the structure of BeF-bound H+,K+-ATPase was analyzed at 8 A resolution. The structure is almost identical to the previously reported AlF-bound E2P structure, unlike the distinctive X-ray structure of BeF-bound SERCA, in which the luminal gate was observed to be widely opened. Since the analyzed structure of the H+,K+-ATPase revealed that both AlF and BeF-bound to the P domain were not exposed to the solvent, the dissociation of XFs induced by divalent cations could be interpreted in terms of stability against thermal fluctuations. Furthermore, the conformational differences found between the cytoplasmic domains of H+,K+-ATPase and SERCA provide a framework to understand the characteristic mechanism, by which divalent cations reactivate the XF-inhibited H+,K+-ATPase. (C) 2009 Elsevier Inc. All rights reserved.
引用
收藏
页码:60 / 68
页数:9
相关论文
共 34 条
[1]
Inter-subunit interaction of gastric H+,K+-ATPase prevents reverse reaction of the transport cycle [J].
Abe, Kazuhiro ;
Tani, Kazutoshi ;
Nishizawa, Tomohiro ;
Fujiyoshi, Yoshinori .
EMBO JOURNAL, 2009, 28 (11) :1637-1643
[2]
A LEAST-SQUARES METHOD FOR DETERMINING STRUCTURE FACTORS IN 3-DIMENSIONAL TILTED-VIEW RECONSTRUCTIONS [J].
AGARD, DA .
JOURNAL OF MOLECULAR BIOLOGY, 1983, 167 (04) :849-852
[3]
FLUORIDE COMPLEXES OF ALUMINUM OR BERYLLIUM ACT ON G-PROTEINS AS REVERSIBLY BOUND ANALOGS OF THE GAMMA-PHOSPHATE OF GTP [J].
BIGAY, J ;
DETERRE, P ;
PFISTER, C ;
CHABRE, M .
EMBO JOURNAL, 1987, 6 (10) :2907-2913
[4]
A METHOD FOR THE DETERMINATION OF INORGANIC-PHOSPHATE IN THE PRESENCE OF LABILE ORGANIC PHOSPHATE AND HIGH-CONCENTRATIONS OF PROTEIN - APPLICATION TO LENS ATPASES [J].
CHIFFLET, S ;
TORRIGLIA, A ;
CHIESA, R ;
TOLOSA, S .
ANALYTICAL BIOCHEMISTRY, 1988, 168 (01) :1-4
[5]
CHOW DC, 1995, J EXP BIOL, V198, P1
[6]
MRC image processing programs [J].
Crowther, RA ;
Henderson, R ;
Smith, JM .
JOURNAL OF STRUCTURAL BIOLOGY, 1996, 116 (01) :9-16
[7]
Distinct natures of beryllium fluoride-bound, aluminum fluoride-bound, and magnesium fluoride-bound stable analogues of an ADP-insensitive phosphoenzyme intermediate of sarcoplasmic reticulum Ca2+-ATPase -: Changes in catalytic and transport sites during phosphoenzyme hydrolysis [J].
Danko, S ;
Yamasaki, K ;
Daiho, T ;
Suzuki, H .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (15) :14991-14998
[8]
Formation of the Stable Structural Analog of ADP-sensitive Phosphoenzyme of Ca2+-ATPase with Occluded Ca2+ by Beryllium Fluoride STRUCTURAL CHANGES DURING PHOSPHORYLATION AND ISOMERIZATION [J].
Danko, Stefania ;
Daiho, Takashi ;
Yamasaki, Kazuo ;
Liu, Xiaoyu ;
Suzuki, Hiroshi .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (34) :22722-22735
[9]
E2P State Stabilization by the N-terminal Tail of the H,K-ATPase β-Subunit Is Critical for Efficient Proton Pumping under in Vivo Conditions [J].
Duerr, Katharina L. ;
Abe, Kazuhiro ;
Tavraz, Neslihan N. ;
Friedrich, Thomas .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (30) :20147-20154
[10]
Functional Significance of E2 State Stabilization by Specific α/β-Subunit Interactions of Na,K- and H,K-ATPase [J].
Duerr, Katharina L. ;
Tavraz, Neslihan N. ;
Dempski, Robert E. ;
Bamberg, Ernst ;
Friedrich, Thomas .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (06) :3842-3854