A novel protein fold and extreme domain swapping in the dimeric TorD chaperone from Shewanella massilia

被引:54
作者
Tranier, S
Iobbi-Nivol, C
Birck, C
Ilbert, M
Mortier-Barrière, I
Méjean, V
Samama, JP
机构
[1] Inst Pharmacol & Biol Struct, Grp Cristallog Biol, F-31077 Toulouse, France
[2] CNRS, Inst Biol Struct & Microbiol, Chim Bacterienne Lab, F-13402 Marseille 20, France
关键词
TorD; chaperone; 3D domain swapping; twin-arginine translocation; X-ray structure; molybdoenzyme;
D O I
10.1016/S0969-2126(03)00008-X
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
TorD is the cytoplasmic chaperone involved in the maturation of the molybdoenzyme TorA prior to the translocation of the folded protein into the periplasm. The X-ray structure at 2.4 Angstrom resolution of the TorD dimer reveals extreme domain swapping between the two subunits. The all-helical architecture of the globular domains within the intertwined molecular dimer shows no similarity with known protein structures. According to sequence similarities, this new fold probably represents the architecture of the chaperones associated with the bacterial DMSO/TMAO reductases and also that of proteins of yet unknown functions. The occurrence of multiple oligomeric forms and the chaperone activity of both monomeric and dimeric TorD raise questions about the possible biological role of domain swapping in this protein.
引用
收藏
页码:165 / 174
页数:10
相关论文
共 49 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]   BACTERIAL REDUCTION OF TRIMETHYLAMINE OXIDE [J].
BARRETT, EL ;
KWAN, HS .
ANNUAL REVIEW OF MICROBIOLOGY, 1985, 39 :131-149
[3]   DOMAIN SWAPPING - ENTANGLING ALLIANCES BETWEEN PROTEINS [J].
BENNETT, MJ ;
CHOE, S ;
EISENBERG, D .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (08) :3127-3131
[4]   Proline-dependent oligomerization with arm exchange [J].
Bergdoll, M ;
Remy, MH ;
Cagnon, C ;
Masson, JM ;
Dumas, P .
STRUCTURE, 1997, 5 (03) :391-401
[5]   The Tat protein export pathway [J].
Berks, BC ;
Sargent, F ;
Palmer, T .
MOLECULAR MICROBIOLOGY, 2000, 35 (02) :260-274
[6]   A novel protein transport system involved in the biogenesis of bacterial electron transfer chains [J].
Berks, BC ;
Sargent, F ;
De Leeuw, E ;
Hinsley, AP ;
Stanley, NR ;
Jack, RL ;
Buchanan, G ;
Palmer, T .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 2000, 1459 (2-3) :325-330
[7]   DATA APPRAISAL, EVALUATION AND DISPLAY FOR SYNCHROTRON RADIATION EXPERIMENTS - HARDWARE AND SOFTWARE [J].
BOULIN, C ;
KEMPF, R ;
KOCH, MHJ ;
MCLAUGHLIN, SM .
NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT, 1986, 249 (2-3) :399-407
[8]   Crystal structure and mutational analysis the human CDK2 kinase complex with cell cycle-regulatory protein CksHs1 [J].
Bourne, Y ;
Watson, MH ;
Hickey, MJ ;
Holmes, W ;
Rocque, W ;
Reed, SI ;
Tainer, JA .
CELL, 1996, 84 (06) :863-874
[9]   ASSESSMENT OF PHASE ACCURACY BY CROSS VALIDATION - THE FREE R-VALUE - METHODS AND APPLICATIONS [J].
BRUNGER, AT .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1993, 49 :24-36
[10]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921