The PEDANT genome database in 2005

被引：44

作者：

Riley, ML

Schmidt, T

Wagner, C

Mewes, HW

Frishman, D

机构：

[1] Natl Res Ctr Hlth & Environm, GSF, Inst Bioinformat, D-85764 Neuherberg, Germany

[2] Tech Univ Munich, Wissenschaftszentrum Weihenstephan, Dept Genome Oriented Bioinformat, D-85350 Freising Weihenstephan, Germany

[3] Biomax Informat AG, D-82152 Martinsried, Germany

来源：

NUCLEIC ACIDS RESEARCH | 2005年 / 33卷

关键词：

D O I：

10.1093/nar/gki019

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The PEDANT genome database (http://pedant.gsf.de) contains pre-computed bioinformatics analyses of publicly available genomes. Its main mission is to provide robust automatic annotation of the vast majority of amino acid sequences, which have not been subjected to in-depth manual curation by human experts in high-quality protein sequence databases. By design PEDANT annotation is genome-oriented, making it possible to explore genomic context of gene products, and evaluate functional and structural content of genomes using a category-based query mechanism. At present, the PEDANT database contains exhaustive annotation of over 1240000 proteins from 270 eubacterial, 23 archeal and 41 eukaryotic genomes.

引用

页码：D308 / D310

页数：3

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