Water molecules hydrogen bonding to aromatic acceptors of amino acids: the structure of Tyr-Tyr-Phe dihydrate and a crystallographic database study on peptides

被引:36
作者
Steiner, T
Schreurs, AMM
Kanters, JA
Kroon, J
机构
[1] Free Univ Berlin, Inst Kristallog, D-14195 Berlin, Germany
[2] Univ Utrecht, Dept Crystal & Struct Chem, Bijvoet Ctr Biomol Res, NL-3584 CH Utrecht, Netherlands
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 1998年 / 54卷
关键词
D O I
10.1107/S0907444997007981
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of Tyr-Tyr-Phe dihydrate contains a hydrogen bond formed between a water molecule and the Phe side chain. The geometry is centered with a distance of 3.26 Angstrom between the water O atom and the aromatic centroid. In a database study on hydrated peptides, four related examples are found which exhibit a wide variability of hydrogen-bond geometries. The intermolecular surroundings of the water molecules are inspected, showing that they are typically involved in complex networks of conventional and non-conventional hydrogen bonds. Possible relevance for protein hydration is given.
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页码:25 / 31
页数:7
相关论文
共 34 条
[1]   THE DEVELOPMENT OF VERSION-3 AND VERSION-4 OF THE CAMBRIDGE STRUCTURAL DATABASE SYSTEM [J].
ALLEN, FH ;
DAVIES, JE ;
GALLOY, JJ ;
JOHNSON, O ;
KENNARD, O ;
MACRAE, CF ;
MITCHELL, EM ;
MITCHELL, GF ;
SMITH, JM ;
WATSON, DG .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1991, 31 (02) :187-204
[2]   SIR92 - a program for automatic solution of crystal structures by direct methods [J].
ALTOMARE, A ;
CASCARANO, G ;
GIACOVAZZO, G ;
GUAGLIARDI, A ;
BURLA, MC ;
POLIDORI, G ;
CAMALLI, M .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1994, 27 :435-435
[3]   X-RAY-DIFFRACTION EVIDENCE FOR AROMATIC PI HYDROGEN-BONDING TO WATER [J].
ATWOOD, JL ;
HAMADA, F ;
ROBINSON, KD ;
ORR, GW ;
VINCENT, RL .
NATURE, 1991, 349 (6311) :683-684
[4]   CRYSTAL-STRUCTURE OF TRIBUTYLAMMONIUM TETRAPHENYLBORATE MONOHYDRATE - EXAMPLE FOR H-PI INTERACTION [J].
AUBRY, A ;
PROTAS, J ;
MORENOGONZALEZ, E ;
MARRAUD, M .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1977, 33 (AUG15) :2572-2578
[5]   HYDROGEN-BONDING IN GLOBULAR-PROTEINS [J].
BAKER, EN ;
HUBBARD, RE .
PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 1984, 44 (02) :97-179
[6]   CRYSTAL-CHEMISTRY OF TETRARADIAL SPECIES .4. HYDROGEN-BONDING TO AROMATIC PI-SYSTEMS - CRYSTAL-STRUCTURES OF 15 TETRAPHENYLBORATES WITH ORGANIC AMMONIUM CATIONS [J].
BAKSHI, PK ;
LINDEN, A ;
VINCENT, BR ;
ROE, SP ;
ADHIKESAVALU, D ;
CAMERON, TS ;
KNOP, O .
CANADIAN JOURNAL OF CHEMISTRY, 1994, 72 (05) :1273-1293
[7]   Structural and energetic responses to cavity-creating mutations in hydrophobic cores: Observation of a buried water molecule and the hydrophilic nature of such hydrophobic cavities [J].
Buckle, AM ;
Cramer, P ;
Fersht, AR .
BIOCHEMISTRY, 1996, 35 (14) :4298-4305
[8]   AMINO-AROMATIC INTERACTIONS IN PROTEINS [J].
BURLEY, SK ;
PETSKO, GA .
FEBS LETTERS, 1986, 203 (02) :139-143
[9]  
CHIANG CC, 1982, INT J PEPT PROT RES, V20, P414
[10]  
DEEG A, 1993, Z NATURFORSCH B, V48, P571