Exploring ramachandran and Chi space: Conformationally constrained amino acids and peptides in the design of bioactive polypeptide ligands

被引:137
作者
Cowell, SM [1 ]
Lee, YS [1 ]
Cain, JP [1 ]
Hruby, VJ [1 ]
机构
[1] Univ Arizona, Dept Chem, Tucson, AZ 85721 USA
关键词
constrained amino acids; constrained peptides; ligand-receptor interactions; drug design;
D O I
10.2174/0929867043364270
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Ligand binding and concomitant changes in receptor structure provide the means to target signal transduction pathways. With appropriate refinement of the ligand's interaction with the "receptor," one in theory could produce ligands that have greater therapeutic benefits. This review will discuss how, when these ligands are amino acids and peptides, the introduction of appropriate conformational constraints provides a powerful strategy for improved drug design. This review will discuss how various constraints on amino acids can provide a powerful tool for ligand design, determination of the three dimensional pharmacophore and new insights into receptor systems and information transduction. Through the use of constrained ligands, new information regarding their interaction with their "receptor" systems, and further refinement of the use of constraints, scientists can produce more beneficial drugs for mankind.
引用
收藏
页码:2785 / 2798
页数:14
相关论文
共 142 条
[1]   A new approach to search for the bioactive conformation of glucagon: Positional cyclization scanning [J].
Ahn, JM ;
Gitu, PM ;
Medeiros, M ;
Swift, JR ;
Trivedi, D ;
Hruby, VJ .
JOURNAL OF MEDICINAL CHEMISTRY, 2001, 44 (19) :3109-3116
[2]   Discovery of a novel series of potent and selective substrate-based inhibitors of p60c-src protein tyrosine kinase:: Conformational and topographical constraints in peptide design [J].
Alfaro-Lopez, J ;
Yuan, W ;
Phan, BC ;
Kamath, J ;
Lou, Q ;
Lam, KS ;
Hruby, VJ .
JOURNAL OF MEDICINAL CHEMISTRY, 1998, 41 (13) :2252-2260
[3]   POTENT AND PROLONGED ACTING CYCLIC LACTAM ANALOGS OF ALPHA-MELANOTROPIN - DESIGN BASED ON MOLECULAR-DYNAMICS [J].
ALOBEIDI, F ;
CASTRUCCI, AMD ;
HADLEY, ME ;
HRUBY, VJ .
JOURNAL OF MEDICINAL CHEMISTRY, 1989, 32 (12) :2555-2561
[4]   DESIGN OF A NEW CLASS OF SUPERPOTENT CYCLIC ALPHA-MELANOTROPINS BASED ON QUENCHED DYNAMIC SIMULATIONS [J].
ALOBEIDI, F ;
HADLEY, ME ;
PETTITT, BM ;
HRUBY, VJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (09) :3413-3416
[5]   IBTM-containing gramicidin S analogues: Evidence for IBTM as a suitable type II' beta-turn mimetic [J].
Andreu, D ;
Ruiz, S ;
Carreno, C ;
Alsina, J ;
Albericio, F ;
Jimenez, MA ;
delaFiguera, N ;
Herranz, R ;
GarciaLopez, MT ;
GonzalezMuniz, R .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (44) :10579-10586
[6]   Rhodopsin-transducin interface: Studies with conformationally constrained peptides [J].
Arimoto, R ;
Kisselev, OG ;
Makara, GM ;
Marshall, GR .
BIOPHYSICAL JOURNAL, 2001, 81 (06) :3285-3293
[7]   Synthesis and opioid activity of conformationally constrained dynorphin A analogues .2. Conformational constraint in the ''Address'' sequence [J].
Arttamangkul, S ;
Ishmael, JE ;
Murray, TF ;
Grandy, DK ;
DeLander, GE ;
Kieffer, BL ;
Aldrich, JV .
JOURNAL OF MEDICINAL CHEMISTRY, 1997, 40 (08) :1211-1218
[8]   BETA-TURN TOPOGRAPHY [J].
BALL, JB ;
HUGHES, RA ;
ALEWOOD, PF ;
ANDREWS, PR .
TETRAHEDRON, 1993, 49 (17) :3467-3478
[9]   Flexibility, conformation spaces, and bioactivity [J].
Becker, OM ;
Levy, Y ;
Ravitz, O .
JOURNAL OF PHYSICAL CHEMISTRY B, 2000, 104 (09) :2123-2135
[10]  
Belvisi L, 1999, EUR J ORG CHEM, V1999, P389