A speed limit for conformational change of an allosteric membrane protein

被引:65
作者
Chakrapani, S
Auerbach, A
机构
[1] SUNY Buffalo, Dept Physiol & Biophys, Buffalo, NY 14214 USA
[2] SUNY Buffalo, Ctr Single Mol Biophys, Buffalo, NY 14214 USA
关键词
channel gating; nicotinic acetylcholine receptor; energy landscape; transition state;
D O I
10.1073/pnas.0406777102
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Neuromuscular acetylcholine receptors are synaptic ion channels that open and close with rate constants of approximate to48,000 s(-1) and approximate to1,700 s-1, respectively (in adult mouse, at 24degreesC, -100 mV membrane potential). Perturbations of many different sites in the protein can change these rate constants, with those in the extracellular domain mainly affecting channel-opening and many of those in the membrane and intracellular domains mainly affecting channel-closing. We used single-channel recordings to measure the total open time per activation (tau(b)) elicited by a low concentration of the natural transmitter, acetylcholine. tau(b) increased in constructs with mutations that increased the gating equilibrium constant by either increasing the opening or decreasing the closing rate constant. However, tau(b) did not approach the same asymptote in fast-opening and slow-closing constructs. The maximum value for the slow closers was about twice that for the fast openers. One interpretation of this difference is that there is an upper limit to the channel-opening rate constant, which we estimate to be approximate to0.86 mus(-1). One possibility is that this limit is the rate of conformational change in the absence of an overall activation barrier and thus reflects the kinetic prefactor for the acetylcholine receptor opening isomerization.
引用
收藏
页码:87 / 92
页数:6
相关论文
共 44 条
[1]   THE ROLE OF SOLVENT VISCOSITY IN THE DYNAMICS OF PROTEIN CONFORMATIONAL-CHANGES [J].
ANSARI, A ;
JONES, CM ;
HENRY, ER ;
HOFRICHTER, J ;
EATON, WA .
SCIENCE, 1992, 256 (5065) :1796-1798
[2]  
AUERBACH A, 2005, IN PRESS P NATL ACAD, V102
[3]   Observation of distinct nanosecond and microsecond protein folding events [J].
Ballew, RM ;
Sabelko, J ;
Gruebele, M .
NATURE STRUCTURAL BIOLOGY, 1996, 3 (11) :923-926
[4]   Direct observation of fast protein folding: The initial collapse of apomyoglobin [J].
Ballew, RM ;
Sabelko, J ;
Gruebele, M .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (12) :5759-5764
[5]   The speed limit for protein folding measured by triplet-triplet energy transfer [J].
Bieri, O ;
Wirz, J ;
Hellrung, B ;
Schutkowski, M ;
Drewello, M ;
Kiefhaber, T .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (17) :9597-9601
[6]   Crystal structure of an ACh-binding protein reveals the ligand-binding domain of nicotinic receptors [J].
Brejc, K ;
van Dijk, WJ ;
Klaassen, RV ;
Schuurmans, M ;
van der Oost, J ;
Smit, AB ;
Sixma, TK .
NATURE, 2001, 411 (6835) :269-276
[7]   The role of loop 5 in acetylcholine receptor channel gating [J].
Chakrapani, S ;
Bailey, TD ;
Auerbach, A .
JOURNAL OF GENERAL PHYSIOLOGY, 2003, 122 (05) :521-539
[8]   Gating dynamics of the acetylcholine receptor extracellular domain [J].
Chakrapani, S ;
Bailey, TD ;
Auerbach, A .
JOURNAL OF GENERAL PHYSIOLOGY, 2004, 123 (04) :341-356
[9]   The protein-folding speed limit:: Intrachain diffusion times set by electron-transfer rates in denatured Ru(NH3)5(His-33)-Zn-cytochrome c [J].
Chang, IJ ;
Lee, JC ;
Winkler, JR ;
Gray, HB .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (07) :3838-3840
[10]   RELAXATION AND FLUCTUATIONS OF MEMBRANE CURRENTS THAT FLOW THROUGH DRUG-OPERATED CHANNELS [J].
COLQUHOUN, D ;
HAWKES, AG .
PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1977, 199 (1135) :231-262