A novel sRNA that modulates virulence and environmental fitness of Vibrio cholerae

被引:18
作者
Song, Tianyan [1 ]
Wai, Sun Nyunt [1 ]
机构
[1] Umea Univ, Dept Mol Biol, SE-90187 Umea, Sweden
关键词
sRNA; virulence factors; outer membrane vesicles; V; cholerae; OUTER-MEMBRANE VESICLES; MEDIATED EXPORT; RELEASE; GENES; IDENTIFICATION; EXPRESSION; ISLANDS; STRESS; TOXIN;
D O I
10.4161/rna.6.3.8371
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We recently described the discovery and initial functional characterization of a new sRNA, VrrA, in Vibrio cholerae O1 strain A1552. The VrrA homologs were found in all Vibrio strains whose genome sequences were reported at present. In this article, we summarize the multi-functional features of VrrA in V cholerae pathogenesis and physiology, especially in relation to the regulation of outer membrane vesicle formation and its consequence in environmental adaptation of the bacterium. As the vrrA gene was not predicted by any of the previous bioinformatics-based genome-wide screenings for sRNA, we discuss the reasons and give suggestion on improving current bioinformatics tools.
引用
收藏
页码:254 / 258
页数:5
相关论文
共 41 条
[1]   Release of the type I secreted α-haemolysin via outer membrane vesicles from Escherichia coli [J].
Balsalobre, C ;
Silván, JM ;
Berglund, S ;
Mizunoe, Y ;
Uhlin, BE ;
Wai, SN .
MOLECULAR MICROBIOLOGY, 2006, 59 (01) :99-112
[2]   Escherichia coli tol-pal mutants form outer membrane vesicles [J].
Bernadac, A ;
Gavioli, M ;
Lazzaroni, JC ;
Raina, S ;
Lloubès, R .
JOURNAL OF BACTERIOLOGY, 1998, 180 (18) :4872-4878
[3]   Structures of gram-negative cell walls and their derived membrane vesicles [J].
Beveridge, TJ .
JOURNAL OF BACTERIOLOGY, 1999, 181 (16) :4725-4733
[4]  
Delcour AH, 2002, J MOL MICROB BIOTECH, V4, P1
[5]   REGULATORY CASCADE CONTROLS VIRULENCE IN VIBRIO-CHOLERAE [J].
DIRITA, VJ ;
PARSOT, C ;
JANDER, G ;
MEKALANOS, JJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (12) :5403-5407
[6]   Micros for microbes: non-coding regulatory RNAs in bacteria [J].
Gottesman, S .
TRENDS IN GENETICS, 2005, 21 (07) :399-404
[7]   Rfam: annotating non-coding RNAs in complete genomes [J].
Griffiths-Jones, S ;
Moxon, S ;
Marshall, M ;
Khanna, A ;
Eddy, SR ;
Bateman, A .
NUCLEIC ACIDS RESEARCH, 2005, 33 :D121-D124
[8]   DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae [J].
Heidelberg, JF ;
Eisen, JA ;
Nelson, WC ;
Clayton, RA ;
Gwinn, ML ;
Dodson, RJ ;
Haft, DH ;
Hickey, EK ;
Peterson, JD ;
Umayam, L ;
Gill, SR ;
Nelson, KE ;
Read, TD ;
Tettelin, H ;
Richardson, D ;
Ermolaeva, MD ;
Vamathevan, J ;
Bass, S ;
Qin, HY ;
Dragoi, I ;
Sellers, P ;
McDonald, L ;
Utterback, T ;
Fleishmann, RD ;
Nierman, WC ;
White, O ;
Salzberg, SL ;
Smith, HO ;
Colwell, RR ;
Mekalanos, JJ ;
Venter, JC ;
Fraser, CM .
NATURE, 2000, 406 (6795) :477-483
[9]   A survey of small RNA-encoding genes in Escherichia coli [J].
Hershberg, R ;
Altuvia, S ;
Margalit, H .
NUCLEIC ACIDS RESEARCH, 2003, 31 (07) :1813-1820
[10]   Enterotoxigenic Escherichia coli secretes active heat-labile enterotoxin via outer membrane vesicles [J].
Horstman, AL ;
Kuehn, MJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2000, 275 (17) :12489-12496