Two-dimensional map of basic proteins of Haemophilus influenzae

被引:34
作者
Fountoulakis, M
Takács, B
Langen, H
机构
[1] F Hoffmann La Roche & Co Ltd, Preclin Cent Nervous Syst Res Gene Technol, Div Pharma, CH-4070 Basel, Switzerland
[2] F Hoffmann La Roche & Co Ltd, Infect Dis, Div Pharma, CH-4070 Basel, Switzerland
关键词
two-dimensional protein map; two-dimensional polyacrylamide gel electrophoresis; basic proteins; Haemophilus influenzae;
D O I
10.1002/elps.1150190527
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Haemophilus influenzae is a bacterium of medical interest of which the entire genome has been sequenced. The proteome of the microorganism has been analyzed by two-dimensional gel electrophoresis, during which immobilized pH 3-10 gradient strips were used and approximately 300 proteins were identified. In order to detect additional, basic proteins, we analyzed the soluble protein fraction of H. influenzae and the proteins of fractions collected from affinity chromatography on heparin, by two-dimensional gel electrophoresis, using for the first-dimensional separation immobilized pH gradient strips comprising the pH region of 6-11. The protein spots were analyzed by matrix-assisted laser desorption ionization-mass spectrometry. One hundred and two proteins were identified, of which 58 were identified for the first time. A large percentage of the basic proteins represent nucleic acid binding and, in particular, ribosomal proteins. The locations of the identified basic proteins of H. influenzae are indicated in a two-dimensional map.
引用
收藏
页码:761 / 766
页数:6
相关论文
共 16 条
[1]   A NEW-GENERATION OF INFORMATION-RETRIEVAL TOOLS FOR BIOLOGISTS - THE EXAMPLE OF THE EXPASY WWW SERVER [J].
APPEL, RD ;
BAIROCH, A ;
HOCHSTRASSER, DF .
TRENDS IN BIOCHEMICAL SCIENCES, 1994, 19 (06) :258-260
[2]   A NONLINEAR WIDE-RANGE IMMOBILIZED PH GRADIENT FOR 2-DIMENSIONAL ELECTROPHORESIS AND ITS DEFINITION IN A RELEVANT PH SCALE [J].
BJELLQVIST, B ;
PASQUALI, C ;
RAVIER, F ;
SANCHEZ, JC ;
HOCHSTRASSER, D .
ELECTROPHORESIS, 1993, 14 (12) :1357-1365
[3]   CHARACTERIZATION OF HAEMOPHILUS-INFLUENZAE PROTEINS BY 2-DIMENSIONAL GEL-ELECTROPHORESIS [J].
CASH, P ;
ARGO, E ;
BRUCE, KD .
ELECTROPHORESIS, 1995, 16 (01) :135-148
[4]   WHOLE-GENOME RANDOM SEQUENCING AND ASSEMBLY OF HAEMOPHILUS-INFLUENZAE RD [J].
FLEISCHMANN, RD ;
ADAMS, MD ;
WHITE, O ;
CLAYTON, RA ;
KIRKNESS, EF ;
KERLAVAGE, AR ;
BULT, CJ ;
TOMB, JF ;
DOUGHERTY, BA ;
MERRICK, JM ;
MCKENNEY, K ;
SUTTON, G ;
FITZHUGH, W ;
FIELDS, C ;
GOCAYNE, JD ;
SCOTT, J ;
SHIRLEY, R ;
LIU, LI ;
GLODEK, A ;
KELLEY, JM ;
WEIDMAN, JF ;
PHILLIPS, CA ;
SPRIGGS, T ;
HEDBLOM, E ;
COTTON, MD ;
UTTERBACK, TR ;
HANNA, MC ;
NGUYEN, DT ;
SAUDEK, DM ;
BRANDON, RC ;
FINE, LD ;
FRITCHMAN, JL ;
FUHRMANN, JL ;
GEOGHAGEN, NSM ;
GNEHM, CL ;
MCDONALD, LA ;
SMALL, KV ;
FRASER, CM ;
SMITH, HO ;
VENTER, JC .
SCIENCE, 1995, 269 (5223) :496-512
[5]   Two-dimensional map of Haemophilus influenzae following protein enrichment by heparin chromatography [J].
Fountoulakis, M ;
Langen, H ;
Evers, S ;
Gray, C ;
Takacs, B .
ELECTROPHORESIS, 1997, 18 (07) :1193-1202
[6]   Large-scale identification of proteins of Haemophilus influenzae by amino acid composition analysis [J].
Fountoulakis, M ;
Juranville, JF ;
Berndt, P .
ELECTROPHORESIS, 1997, 18 (15) :2968-2977
[7]   Identification of proteins by matrix-assisted laser desorption ionization mass spectrometry following in-gel digestion in low-salt, nonvolatile buffer and simplified peptide recovery [J].
Fountoulakis, M ;
Langen, H .
ANALYTICAL BIOCHEMISTRY, 1997, 250 (02) :153-156
[8]  
*GEN COMP GROUPS, 1994, PROGR MAN WISC PACK
[9]   THE CURRENT STATE OF TWO-DIMENSIONAL ELECTROPHORESIS WITH IMMOBILIZED PH GRADIENTS [J].
GORG, A ;
POSTEL, W ;
GUNTHER, S .
ELECTROPHORESIS, 1988, 9 (09) :531-546
[10]  
GORG A, 1997, ICES 97 INT COUNC EL