Environmental modulation of protein cation-π interactions

被引:28
作者
Berry, Bruce W.
Elvekrog, Margaret M.
Tommos, Cecilia [1 ]
机构
[1] Univ Penn, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
[2] Stockholm Univ, Arrhenius Labs Nat Sci, SE-10691 Stockholm, Sweden
关键词
D O I
10.1021/ja068957a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Protein cation-pi interactions are frequently found near the protein surface with their interacting residues partly solvent exposed. The structurally characterized alpha W-3 model protein contains the W32/K36 cation-pi interaction which has properties similar to those of naturally occurring protein cation-pi interactions. alpha W-3 was studied with the following results: Cation-pi interactions formed by a buried tryptophan and a partly solvated lysine, arginine, or histidine range from -0.8 to -0.5 kcal mol(-1) and rank as: W32/K36 approximate to W32/R36 > W32/H36. The W32/K36 pair in alpha W-3 represents the first W/K cation-pi interaction for which both the structure and the bond energy have been experimentally determined. Upon increasing the solvent exposure of the cation-pi pair, the W/K interaction energy drops from -0.73 to -0.06 and +0.15 kcal mol(-1). These results suggest that solvent exposure can tune the interaction energy between a tryptophan and a lysine by at least 0.9 kcal mol(-1).
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收藏
页码:5308 / +
页数:3
相关论文
共 20 条
[1]   Stabilizing interactions between aromatic and basic side chains in α-helical peptides and proteins.: Tyrosine effects on helix circular dichroism [J].
Andrew, CD ;
Bhattacharjee, S ;
Kokkoni, N ;
Hirst, JD ;
Jones, GR ;
Doig, AJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (43) :12706-12714
[2]   THE (I, I+4) PHE-HIS INTERACTION STUDIED IN AN ALANINE-BASED ALPHA-HELIX [J].
ARMSTRONG, KM ;
FAIRMAN, R ;
BALDWIN, RL .
JOURNAL OF MOLECULAR BIOLOGY, 1993, 230 (01) :284-291
[3]   Structure of a de novo designed protein model of radical enzymes [J].
Dai, QH ;
Tommos, C ;
Fuentes, EJ ;
Blomberg, MRA ;
Dutton, PL ;
Wand, AJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (37) :10952-10953
[4]   The tryptophan/histidine interaction in alpha-helices [J].
FernandezRecio, J ;
Vazquez, A ;
Civera, C ;
Sevilla, P ;
Sancho, J .
JOURNAL OF MOLECULAR BIOLOGY, 1997, 267 (01) :184-197
[5]   PLANAR STACKING INTERACTIONS OF ARGININE AND AROMATIC SIDE-CHAINS IN PROTEINS [J].
FLOCCO, MM ;
MOWBRAY, SL .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 235 (02) :709-717
[6]   A computational study of cation-π interactions vs salt bridges in aqueous media:: Implications for protein engineering [J].
Gallivan, JP ;
Dougherty, DA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (05) :870-874
[7]   Cation-π interactions in structural biology [J].
Gallivan, JP ;
Dougherty, DA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (17) :9459-9464
[8]   Cys-loop receptors: new twists and turns [J].
Lester, HA ;
Dibas, MI ;
Dahan, DS ;
Leite, JF ;
Dougherty, DA .
TRENDS IN NEUROSCIENCES, 2004, 27 (06) :329-336
[9]   HISTIDINE AROMATIC INTERACTIONS IN BARNASE - ELEVATION OF HISTIDINE PK(A) AND CONTRIBUTION TO PROTEIN STABILITY [J].
LOEWENTHAL, R ;
SANCHO, J ;
FERSHT, AR .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 224 (03) :759-770
[10]   The cation-pi interaction [J].
Ma, JC ;
Dougherty, DA .
CHEMICAL REVIEWS, 1997, 97 (05) :1303-1324