Phylogeny of the family Moraxellaceae by 16S rDNA sequence analysis, with special emphasis on differentiation of Moraxella species

被引:43
作者
Pettersson, B
Kodjo, A
Ronaghi, M
Uhlén, M
Tonjum, T
机构
[1] Royal Inst Technol, Dept Biochem & Biotechnol, S-10044 Stockholm, Sweden
[2] Ecole Natl Vet, Lyon, France
[3] Univ Oslo, Natl Hosp, Dept Mol Biol, Inst Med Microbiol, N-0027 Oslo, Norway
来源
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY | 1998年 / 48卷
关键词
Moraxella; 16S rDNA sequences; phylogeny; classification;
D O I
10.1099/00207713-48-1-75
中图分类号
Q93 [微生物学];
学科分类号
071005 [微生物学]; 100705 [微生物与生化药学];
摘要
Thirty-three strains previously classified into 11 species in the bacterial family Moraxellaceae were subjected to phylogenetic analysis based on 16S rRNA sequences, The family Moraxellaceae formed a distinct clade consisting of four phylogenetic groups as judged from branch lengths, bootstrap values and signature nucleotides. Group I contained the classical moraxellae and strains of the coccal moraxellae, previously known as Branhamella, with 16S rRNA similarity of greater than or equal to 95 %. A further division of group I into five tentative clusters is discussed. Group II consisted of two strains representing Moraxella atlantae and Moraxella osloensis. These strains were only distantly related to each other (93.4 %) and also to the other members of the Moraxellaceae (less than or equal to 93 %), Therefore, reasons for reclassification of these species into separate and new genera are discussed. Group III harboured strains of the genus Psychrobacter and strain 752/52 of [Moraxella] phenylpyruvica. This strain of [M.] phenylpyruvica formed an early branch from the group III line of descent, Interestingly, a distant relationship was found between Psychrobacter phenylpyruvicus strain ATCC 23333(T) (formerly classified as [M.] phenylpyruvica) and [M.] phenylpyruvica strain 752/52, exhibiting less than 96% nucleotide similarity between their 165 rRNA sequences, The establishment of a new genus for [M.] phenylpyruvica strain 752/52 is therefore suggested. Group IV contained only two strains of the genus Acinetobacter, Strategies for the development of diagnostic probes and distinctive sequences for 165 rRNA-based species-specific assays within group I are suggested. Although these findings add to the classificatory placements within the Moraxellaceae, analysis of a more comprehensive selection of strains is still needed to obtain a complete classification system within this family.
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页码:75 / 89
页数:15
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