ThiD-TenA: A gene pair fusion in eukaryotes

被引:7
作者
Ouzounis, CA
Kyrpides, NC
机构
[1] SRI Int, Ctr Artificial Intelligence, Menlo Park, CA 94025 USA
[2] Univ Illinois, Dept Microbiol, Urbana, IL 61801 USA
关键词
gene fusion; ThiD; function prediction; transcription; phylogeny;
D O I
10.1007/PL00013145
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Computational analysis of the hypothetical open reading frame MJ0236 from Methanococcus jannaschii reveals its membership to a family of bacterial and eukaryotic proteins, predicted to be the HMP-P kinases involved in thiamin biosyntheis (ThiD). The eukaryotic members of this family contain a C-terminal extension similar to a bacterial transcriptional activator (TenA), thus pointing to a fusion event that took place during cellular evolution. The C-terminal domain is absent from M. jannaschii. The significance of this observation is two-fold: first, this is a case where a fusion protein contains two domains with an unusual phylogenetic distribution, and second, the TenA domain is a rare case of a gene family involved in transcription present both in bacteria and eukaryotes.
引用
收藏
页码:708 / 711
页数:4
相关论文
共 14 条
  • [1] Molecular cloning of thi-4, a gene necessary for the biosynthesis of thiamine in Neurospora crassa
    Akiyama, M
    Nakashima, H
    [J]. CURRENT GENETICS, 1996, 30 (01) : 62 - 67
  • [2] IDENTIFICATION AND ANALYSIS OF THE RHIZOBIUM-MELILOTI EXOAMONP GENES INVOLVED IN EXOPOLYSACCHARIDE BIOSYNTHESIS AND MAPPING OF PROMOTERS LOCATED ON THE EXOHKLAMONP FRAGMENT
    BECKER, A
    KLEICKMANN, A
    KELLER, M
    ARNOLD, W
    PUHLER, A
    [J]. MOLECULAR & GENERAL GENETICS, 1993, 241 (3-4): : 367 - 379
  • [3] FROM GENOME SEQUENCES TO PROTEIN FUNCTION
    BORK, P
    OUZOUNIS, C
    SANDER, C
    [J]. CURRENT OPINION IN STRUCTURAL BIOLOGY, 1994, 4 (03) : 393 - 403
  • [4] Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
    Bult, CJ
    White, O
    Olsen, GJ
    Zhou, LX
    Fleischmann, RD
    Sutton, GG
    Blake, JA
    FitzGerald, LM
    Clayton, RA
    Gocayne, JD
    Kerlavage, AR
    Dougherty, BA
    Tomb, JF
    Adams, MD
    Reich, CI
    Overbeek, R
    Kirkness, EF
    Weinstock, KG
    Merrick, JM
    Glodek, A
    Scott, JL
    Geoghagen, NSM
    Weidman, JF
    Fuhrmann, JL
    Nguyen, D
    Utterback, TR
    Kelley, JM
    Peterson, JD
    Sadow, PW
    Hanna, MC
    Cotton, MD
    Roberts, KM
    Hurst, MA
    Kaine, BP
    Borodovsky, M
    Klenk, HP
    Fraser, CM
    Smith, HO
    Woese, CR
    Venter, JC
    [J]. SCIENCE, 1996, 273 (5278) : 1058 - 1073
  • [5] WHOLE-GENOME RANDOM SEQUENCING AND ASSEMBLY OF HAEMOPHILUS-INFLUENZAE RD
    FLEISCHMANN, RD
    ADAMS, MD
    WHITE, O
    CLAYTON, RA
    KIRKNESS, EF
    KERLAVAGE, AR
    BULT, CJ
    TOMB, JF
    DOUGHERTY, BA
    MERRICK, JM
    MCKENNEY, K
    SUTTON, G
    FITZHUGH, W
    FIELDS, C
    GOCAYNE, JD
    SCOTT, J
    SHIRLEY, R
    LIU, LI
    GLODEK, A
    KELLEY, JM
    WEIDMAN, JF
    PHILLIPS, CA
    SPRIGGS, T
    HEDBLOM, E
    COTTON, MD
    UTTERBACK, TR
    HANNA, MC
    NGUYEN, DT
    SAUDEK, DM
    BRANDON, RC
    FINE, LD
    FRITCHMAN, JL
    FUHRMANN, JL
    GEOGHAGEN, NSM
    GNEHM, CL
    MCDONALD, LA
    SMALL, KV
    FRASER, CM
    SMITH, HO
    VENTER, JC
    [J]. SCIENCE, 1995, 269 (5223) : 496 - 512
  • [6] BACILLUS-SUBTILIS GENOME PROJECT - CLONING AND SEQUENCING OF THE 97KB REGION FROM 325-DEGREES TO 333 DEGREES
    GLASER, P
    KUNST, F
    ARNAUD, M
    COUDART, MP
    GONZALES, W
    HULLO, MF
    IONESCU, M
    LUBOCHINSKY, B
    MARCELINO, L
    MOSZER, I
    PRESECAN, E
    SANTANA, M
    SCHNEIDER, E
    SCHWEIZER, J
    VERTES, A
    RAPOPORT, G
    DANCHIN, A
    [J]. MOLECULAR MICROBIOLOGY, 1993, 10 (02) : 371 - 384
  • [7] Itoh T, 1996, DNA Res, V3, P379, DOI 10.1093/dnares/3.6.379
  • [8] Kyrpides N C, 1996, Microb Comp Genomics, V1, P329
  • [9] NOSAKA K, 1994, J BIOL CHEM, V269, P30510
  • [10] The emergence of major cellular processes in evolution
    Ouzounis, C
    Kyrpides, N
    [J]. FEBS LETTERS, 1996, 390 (02) : 119 - 123