Protein-protein interaction site mapping using NMR-detected mutational scanning

被引:6
作者
Baminger, Bettina
Ludwiczek, Martin L.
Kontaxis, Georg
Knapp, Stefan
Konrat, Robert [1 ]
机构
[1] Univ Vienna, Max F Perutz Labs, Dept Biomol Struct Chem, A-1030 Vienna, Austria
[2] Univ British Columbia, Dept Biochem & Mol Biol, Vancouver, BC, Canada
[3] Univ Oxford, Botnar Res Ctr, SGC, Oxford OX3 7LD, England
关键词
mutagenesis; NMR spectroscopy; Protein Interaction; proteomics;
D O I
10.1007/s10858-007-9154-x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We demonstrate a novel NMR method for the mapping of protein-protein interaction sites. In our approach protein-protein binding sites are mapped by competition binding experiments using indirect NMR reporter technology and Ala positional scanning. The methodology provides high sensitivity, ease of implementation and high-throughput capabilities. The feasibility of the technique is demonstrated with an application to the beta-Catenin/Tcf4 complex.
引用
收藏
页码:133 / 137
页数:5
相关论文
共 21 条
[1]  
Barker N, 2000, ADV CANCER RES, V77, P1
[2]   Functional interaction of beta-catenin with the transcription factor LEF-1 [J].
Behrens, J ;
vonKries, JP ;
Kuhl, M ;
Bruhn, L ;
Wedlich, D ;
Grosschedl, R ;
Birchmeier, W .
NATURE, 1996, 382 (6592) :638-642
[3]   Drosophila Tcf and Groucho interact to repress Wingless signalling activity [J].
Cavallo, RA ;
Cox, RT ;
Moline, MM ;
Roose, J ;
Polevoy, GA ;
Clevers, H ;
Peifer, M ;
Bejsovec, A .
NATURE, 1998, 395 (6702) :604-608
[4]   Hot spots in Tcf4 for the interaction with β-catenin [J].
Fasolini, M ;
Wu, XQ ;
Flocco, M ;
Trosset, JY ;
Oppermann, U ;
Knapp, S .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (23) :21092-21098
[5]   BAND-SELECTIVE RADIOFREQUENCY PULSES [J].
GEEN, H ;
FREEMAN, R .
JOURNAL OF MAGNETIC RESONANCE, 1991, 93 (01) :93-141
[6]   Tcf4 can specifically recognize β-catenin using alternative conformations [J].
Graham, TA ;
Ferkey, DM ;
Mao, F ;
Kimelman, D ;
Xu, WQ .
NATURE STRUCTURAL BIOLOGY, 2001, 8 (12) :1048-1052
[7]   Three-dimensional structure of the armadillo repeat region of beta-catenin [J].
Huber, AH ;
Nelson, WJ ;
Weis, WI .
CELL, 1997, 90 (05) :871-882
[8]   Nuclear localization of beta-catenin by interaction with transcription factor LEF-1 [J].
Huber, O ;
Korn, R ;
McLaughlin, J ;
Ohsugi, M ;
Herrmann, BG ;
Kemler, R .
MECHANISMS OF DEVELOPMENT, 1996, 59 (01) :3-10
[9]   Thermodynamics of the high-affinity interaction of TCF4 with β-catenin [J].
Knapp, S ;
Zamai, M ;
Volpi, D ;
Nardese, V ;
Avanzi, N ;
Breton, J ;
Plyte, S ;
Flocco, M ;
Marconi, M ;
Isacchi, A ;
Caiolfa, VR .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 306 (05) :1179-1189
[10]   Structure of cysteine- and glycine-rich protein CRP2 -: Backbone dynamics reveal motional freedom and independent spatial orientation of the LIM domains [J].
Konrat, R ;
Kräutler, B ;
Weiskirchen, R ;
Bister, K .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (36) :23233-23240