Extreme individual marker FST values do not imply population-specific selection in humans:: the NRG1 example

被引:19
作者
Gardner, Michelle
Williamson, Scott
Casals, Ferran
Bosch, Elena
Navarro, Arcadi
Calafell, Francesc
Bertranpetit, Jaume
Comas, David
机构
[1] Univ Pompeu Fabra, Unitat Biol Evolut, Barcelona 08003, Spain
[2] Cornell Univ, Dept Biol Stat & Computat Biol, Ithaca, NY 14886 USA
关键词
High Linkage Disequilibrium; Continental Region; Linkage Disequilibrium Structure; Continental Group; Extended Haplotype Homozygosity;
D O I
10.1007/s00439-007-0364-9
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Extreme population differentiation, as measured by the F-ST value, has been suggested as an indicator of recent population-specific positive selection. Elevated F-ST values indicating high differentiation between continental groups were previously reported on a linkage disequilibrium region in the Neuregulin 1 gene, a gene which has been associated to schizophrenia. In the present study we show evidence that high F-ST values may not necessarily imply the action of selection, in particular positive selection, neither globally nor regionally, using the example of the NRG1 gene.
引用
收藏
页码:759 / 762
页数:4
相关论文
共 6 条
[1]  
Cann HM, 2002, SCIENCE, V296, P261
[2]  
Cheung K H, 2000, Pac Symp Biocomput, P639
[3]   Extreme population differences across Neuregulin 1 gene, with implications for association studies [J].
Gardner, M ;
González-Neira, A ;
Lao, O ;
Calafell, F ;
Bertranpetit, J ;
Comas, D .
MOLECULAR PSYCHIATRY, 2006, 11 (01) :66-75
[4]   Positive natural selection in the human lineage [J].
Sabeti, P. C. ;
Schaffner, S. F. ;
Fry, B. ;
Lohmueller, J. ;
Varilly, P. ;
Shamovsky, O. ;
Palma, A. ;
Mikkelsen, T. S. ;
Altshuler, D. ;
Lander, E. S. .
SCIENCE, 2006, 312 (5780) :1614-1620
[5]  
Voight BF, 2006, PLOS BIOL, V4, P446, DOI 10.1371/journal.pbio.0040072
[6]  
WALSH EC, 2005, HUM GENET, P1