Advances in molecular labeling, high throughput imaging and machine intelligence portend powerful functional cellular biochemistry tools

被引:55
作者
Price, JH
Goodacre, A
Hahn, K
Hodgson, L
Hunter, EA
Krajewski, S
Murphy, RF
Rabinovich, A
Reed, JC
Heynen, S
机构
[1] Univ Calif San Diego, Dept Bioengn, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Whitaker Inst Biomed Engn, La Jolla, CA 92093 USA
[3] Q3DM Inc, San Diego, CA USA
[4] Scripps Res Inst, Dept Cell Biol, La Jolla, CA USA
[5] Burnham Inst, La Jolla, CA 92037 USA
[6] Carnegie Mellon Univ, Ctr Automated Learning & Discovery, Pittsburgh, PA 15213 USA
[7] Carnegie Mellon Univ, Dept Biol Sci, Pittsburgh, PA 15213 USA
[8] Carnegie Mellon Univ, Dept Biomed Engn, Pittsburgh, PA 15213 USA
[9] Univ Calif San Diego, Dept Comp Sci & Engn, La Jolla, CA 92093 USA
关键词
microscopy; protein activity; pattern analysis; cellular diagnostics; tissue microarrays; drug discovery; fluorescent probes;
D O I
10.1002/jcb.10448
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cellular behavior is complex. Successfully understanding systems at ever-increasing complexity is fundamental to advances in modern science and unraveling the functional details of cellular behavior is no exception. We present a collection of prospectives to provide a glimpse of the techniques that will aid in collecting, managing and utilizing information on complex cellular processes via molecular imaging tools. These include: 1) visualizing intracellular protein activity with fluorescent markers, 2) high throughput (and automated) imaging of multilabeled cells in statistically significant numbers, and 3) machine intelligence to analyze subcellular image localization and pattern. Although not addressed here, the importance of combining cell-image-based information with detailed molecular structure and ligand-receptor binding models cannot be overlooked. Advanced molecular imaging techniques have the potential to impact cellular diagnostics for cancer screening, clinical correlations of tissue molecular patterns for cancer biology, and cellular molecular interactions for accelerating drug discovery. The goal of finally understanding all cellular components and behaviors will be achieved by advances in both instrumentation engineering (software and hardware) and molecular biochemistry.
引用
收藏
页码:194 / 210
页数:17
相关论文
共 92 条
[1]   FLUORESCENCE RATIO IMAGING OF CYCLIC-AMP IN SINGLE CELLS [J].
ADAMS, SR ;
HAROOTUNIAN, AT ;
BUECHLER, YJ ;
TAYLOR, SS ;
TSIEN, RY .
NATURE, 1991, 349 (6311) :694-697
[2]   IMMUNOSUPPRESSION BY GLUCOCORTICOIDS - INHIBITION OF NF-KAPPA-B ACTIVITY THROUGH INDUCTION OF I-KAPPA-B SYNTHESIS [J].
AUPHAN, N ;
DIDONATO, JA ;
ROSETTE, C ;
HELMBERG, A ;
KARIN, M .
SCIENCE, 1995, 270 (5234) :286-290
[3]   Circular permutation and receptor insertion within green fluorescent proteins [J].
Baird, GS ;
Zacharias, DA ;
Tsien, RY .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (20) :11241-11246
[4]  
Bajaj S, 2000, CYTOMETRY, V39, P285
[5]   Automation of primary screening for cervical cancer - Sooner or later? [J].
Bartels, PH ;
Vooijs, GP .
ACTA CYTOLOGICA, 1999, 43 (01) :7-12
[6]   Fetal cells in the maternal circulation: Feasibility for prenatal diagnosis [J].
Bianchi, DW .
BRITISH JOURNAL OF HAEMATOLOGY, 1999, 105 (03) :574-583
[7]   Fetal gender and aneuploidy detection using fetal cells in maternal blood: analysis of NIFTY I data [J].
Bianchi, DW ;
Simpson, JL ;
Jackson, LG ;
Elias, S ;
Holzgreve, W ;
Evans, MI ;
Dukes, KA ;
Sullivan, LM ;
Klinger, KW ;
Bischoff, FZ ;
Hahn, S ;
Johnson, KL ;
Lewis, D ;
Wapner, RJ .
PRENATAL DIAGNOSIS, 2002, 22 (07) :609-615
[8]  
Boland MV, 1998, CYTOMETRY, V33, P366
[9]   Automated analysis of patterns in fluorescence-microscope images [J].
Boland, MV ;
Murphy, RF .
TRENDS IN CELL BIOLOGY, 1999, 9 (05) :201-202
[10]  
Boland MV, 1997, P ANN INT IEEE EMBS, V19, P594, DOI 10.1109/IEMBS.1997.757680