The Comparative Toxicogenomics Database (CTD)

被引:170
作者
Mattingly, CJ [1 ]
Colby, GT
Forrest, JN
Boyer, JL
机构
[1] Mt Desert Isl Biol Lab, Dept Bioinformat, Salsbury Cove, ME 04672 USA
[2] Mt Desert Isl Biol Lab, Ctr Membrane Tox Studies, Salsbury Cove, ME 04672 USA
[3] Mt Desert Isl Biol Lab, Ctr Marine Funct Genom Studies, Salsbury Cove, ME 04672 USA
[4] Yale Univ, Sch Med, Dept Med, New Haven, CT USA
关键词
aquatic; comparative; database; environmental health; fishes; genomic; health; toxicogenomics; toxicology;
D O I
10.1289/ehp.6028
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
The Mount Desert Island Biological Laboratory in Salsbury Cove, Maine, USA, is developing the Comparative Toxicogenomics Database (CTD), a community-supported genomic resource devoted to genes and proteins of human toxicologic significance. CTD will be the first publicly available database to a) provide annotated associations among genes, proteins, references, and toxic agents, with a focus on annotating data from aquatic and mammalian organisms; b) include nucleotide and protein sequences from diverse species; 0 offer a range of analysis tools for customized comparative studies; and a) provide information to investigators on available molecular reagents. This combination of features will facilitate cross-species comparisons of toxicologically significant genes and proteins. These comparisons will promote understanding of molecular evolution, the significance of conserved sequences, the genetic basis of variable sensitivity to environmental agents, and the complex interactions between the environment and human health. CTD is currently under development, and the planned scope and functions of the database are described herein. The intent of this report is to invite community participation in the development of CTD to ensure that it will be a valuable resource for environmental health, molecular biology, and toxicology research.
引用
收藏
页码:793 / 795
页数:3
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