A high-resolution genetic map of the familial Mediterranean fever candidate region allows identification of haplotype-sharing among ethnic groups

被引:42
作者
Balow, JE
Shelton, DA
Orsborn, A
Mangelsdorf, M
Aksentijevich, I
Blake, T
Sood, R
Gardner, D
Liu, R
Pras, E
Levy, EN
Centola, M
Deng, ZM
Zaks, N
Wood, G
Chen, XG
Richards, N
Shohat, M
Livneh, A
Pras, M
Doggett, NA
Collins, FS
Liu, PP
Rotter, JI
FischelGhodsian, N
Gumucio, D
Richards, RI
Kastner, DL
机构
[1] NIAMSD, ARTHRIT & RHEUMATISM BRANCH, BETHESDA, MD 20892 USA
[2] GEORGE WASHINGTON UNIV, GRAD PROGRAM GENET, WASHINGTON, DC 20052 USA
[3] UNIV MICHIGAN, DEPT ANAT & CELL BIOL, ANN ARBOR, MI 48109 USA
[4] ADELAIDE WOMENS & CHILDRENS HOSP, DEPT CYTOGENET & MOL GENET, ADELAIDE, SA 5006, AUSTRALIA
[5] NATL HUMAN GENOME RES INST, LAB GENE TRANSFER, BETHESDA, MD 20892 USA
[6] CHAIM SHEBA MED CTR, DEPT MED C, IL-52621 TEL HASHOMER, ISRAEL
[7] CEDARS SINAI MED CTR, DEPT PEDIAT, LOS ANGELES, CA 90048 USA
[8] CEDARS SINAI MED CTR, DEPT MED GENET, LOS ANGELES, CA 90048 USA
[9] BEILINSON MED CTR, DEPT MED GENET, IL-49100 PETAH TIQWA, ISRAEL
[10] CHAIM SHEBA MED CTR, HELLER INST MED RES, IL-52621 TEL HASHOMER, ISRAEL
[11] LOS ALAMOS NATL LAB, CTR HUMAN GENOME STUDIES, LOS ALAMOS, NM 87545 USA
关键词
D O I
10.1006/geno.1997.4860
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Familial Mediterranean fever (FMF) is a recessive disorder of inflammation caused by mutations in a gene (designated MEFV) on chromosome 16p13.3, We have recently constructed a 1-Mb cosmid contig that includes the FMF critical region. Here we show genotype data for 12 markers from our physical map, including 5 newly identified microsatellites, in FMF families. Intrafamilial recombinations placed MEFV in the similar to 285 kb between D16S468/D16S3070 and D16S3376. We observed significant linkage disequilibrium in the North African Jewish population, and historical recombinants in the founder haplotype placed MEFV between D16S3082 and D16S3373 (similar to 200 kb). In smaller panels of Iraqi Jewish, Arab, and Armenian families, there were significant allelic associations only for D16S3370 and D16S2617 among the Armenians. A sizable minority of Iraqi Jewish and Armenian carrier chromosomes appeared to be derived from the North African Jewish ancestral haplotype. We observed a unique FMF haplotype common to Iraqi Jews, Arabs, and Armenians and two other haplotypes restricted to either the Iraqi Jewish or the Armenian population. These data support the view that a few major mutations account for a large percentage of the cases of FMF and suggest that same of these mutations arose before the affected Middle Eastern populations diverged from one another. (C) 1997 Academic Press.
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页码:280 / 291
页数:12
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