MAP-O-MAT: internet-based linkage mapping

被引：23

作者：

Kong, X ^{[1
]}

Matise, TC ^{[1
]}

机构：

[1] Rutgers State Univ, Dept Genet, Piscataway, NJ 08854 USA

来源：

BIOINFORMATICS | 2005年 / 21卷 / 04期

关键词：

D O I：

10.1093/bioinformatics/bti024

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

: MAP-O-MAT is a web-based server for automated linkage mapping of human polymorphic DNA markers. MAP-O-MAT facilitates the verification of order and map distances for custom mapping sets using genotype data from the CEPH database, and from the Marshfield, SNP Consortium and Rutgers linkage maps (exclusive to the deCODE genotyping data). The CRI-MAP program is used for likelihood calculations and some mapping algorithms, and physical map positions are provided from the human genome assembly.

引用

页码：557 / 559

页数：3

共 9 条

[1] Comprehensive human genetic maps: Individual and sex-specific variation in recombination
Broman, KW
Murray, JC
Sheffield, VC
White, RL
Weber, JL
[J]. AMERICAN JOURNAL OF HUMAN GENETICS, 1998, 63 (03) : 861 - 869
[2] PROGRAM DESCRIPTION - CENTER-DETUDE-DU-POLYMORPHISME-HUMAIN (CEPH) - COLLABORATIVE GENETIC-MAPPING OF THE HUMAN GENOME
DAUSSET, J
CANN, H
COHEN, D
LATHROP, M
LALOUEL, JM
WHITE, R
[J]. GENOMICS, 1990, 6 (03) : 575 - 577
[3] A comprehensive genetic map of the human genome based on 5,264 microsatellites
Dib, C
Faure, S
Fizames, C
Samson, D
Drouot, N
Vignal, A
Millasseau, P
Marc, S
Hazan, J
Seboun, E
Lathrop, M
Gyapay, G
Morissette, J
Weissenbach, J
[J]. NATURE, 1996, 380 (6570) : 152 - 154
[4] GUYER M, 1992, SCIENCE, V258, P67
[5] A high-resolution recombination map of the human genome
Kong, A
Gudbjartsson, DF
Sainz, J
Jonsdottir, GM
Gudjonsson, SA
Richardsson, B
Sigurdardottir, S
Barnard, J
Hallbeck, B
Masson, G
Shlien, A
Palsson, ST
Frigge, ML
Thorgeirsson, TE
Gulcher, JR
Stefansson, K
[J]. NATURE GENETICS, 2002, 31 (03) : 241 - 247
[6] CONSTRUCTION OF MULTILOCUS GENETIC-LINKAGE MAPS IN HUMANS
LANDER, ES
GREEN, P
[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1987, 84 (08) : 2363 - 2367
[7] A 3.9-centimorgan-resolution human single-nucleotide polymorphism linkage map and screening set
Matise, TC
Sachidanandam, R
Clark, AG
Kruglyak, L
Wijsman, E
Kakol, J
Buyske, S
Chui, B
Cohen, P
de Toma, C
Ehm, M
Glanowski, S
He, CS
Heil, J
Markianos, K
McMullen, I
Pericak-Vance, MA
Silbergleit, A
Stein, L
Wagner, M
Wilson, AF
Winick, JD
Winn-Deen, ES
Yamashiro, CT
Cann, HM
Lai, E
Holden, AL
[J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 73 (02) : 271 - 284
[8] AUTOMATED CONSTRUCTION OF GENETIC-LINKAGE MAPS USING AN EXPERT-SYSTEM (MULTIMAP) - A HUMAN GENOME LINKAGE MAP
MATISE, TC
PERLIN, M
CHAKRAVARTI, A
[J]. NATURE GENETICS, 1994, 6 (04) : 384 - 390
[9] A COMPREHENSIVE HUMAN LINKAGE WITH CENTIMORGAN DENSITY
MURRAY, JC
BUETOW, KH
WEBER, JL
LUDWIGSEN, S
SCHERPBIERHEDDEMA, T
MANION, F
QUILLEN, J
SHEFFIELD, VC
SUNDEN, S
DUYK, GM
WEISSENBACH, J
GYAPAY, G
DIB, C
MORRISSETTE, J
LATHROP, GM
VIGNAL, A
WHITE, R
MATSUNAMI, N
GERKEN, S
MELIS, R
ALBERTSEN, H
PLAETKE, R
ODELBERG, S
WARD, D
DAUSSET, J
COHEN, D
CANN, H
[J]. SCIENCE, 1994, 265 (5181) : 2049 - 2054

← 1 →