Off-resonance effects in 15N T2 CPMG measurements

被引:45
作者
Korzhnev, DM [1 ]
Tischenko, EV [1 ]
Arseniev, AS [1 ]
机构
[1] Russian Acad Sci, Shemyakin & Ovchinnikov Inst Bioorgan Chem, Moscow 117871, Russia
基金
俄罗斯基础研究基金会;
关键词
backbone dynamics; conformational exchange; proteins; relaxation;
D O I
10.1023/A:1008348827208
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The systematic difference between T-2 values obtained from CPMG and T(1)rho experiments was observed for backbone N-15 nuclei of bacterial ribonuclease barnase. Theoretical consideration suggests that the observed difference is caused by off-resonance effects of 180 degrees pulses of the CPMG pulse train. Namely, at off-resonance conditions T-1-dependent secondary echo coherence pathways considerably contribute to the signal decay in the CPMG experiment and result in systematic (up to 10%) offset-dependent overestimation of N-15 T-2 measured by the CPMG technique. Under certain circumstances off-resonance effects result in dependence of N-15 T-2 on CPMG frequency, which might be erroneously interpreted as conformational exchange on the millisecond time-scale. A procedure for numerical correction of (1)5N T-2 (CPMG) data is proposed.
引用
收藏
页码:231 / 237
页数:7
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