Identification of Thai isolates assigned to the genus Gluconobacter based on 16S-23S rDNA ITS restriction analysis

被引:6
作者
Huong, Vu Thi Lan
Malimas, Taweesak
Yukphan, Pattaraporn
Potacharoen, Wanchern
Tanasupawat, Somboon
Loan, Ly Thi Thanh
Tanticharoen, Morakot
Yamada, Yuzo
机构
[1] Natl Sci & Technol Dev Agcy, Natl Ctr Genet Engn & Biotechnol, BIOTEC Culture Collect, BIOTEC Cent Res Unit, Pathum Thani 12120, Thailand
[2] Chulalongkorn Univ, Fac Pharmaceut Sci, Dept Microbiol, Bangkok 10330, Thailand
[3] Res Inst Aquaculture Number 2, Ho Chi Minh City, Vietnam
关键词
acetic acid bacteria; Gluconobacter; phylogeny; alpha-Proteobacteria; 16S-23S rDNA ITS restriction analysis; 16S-23S rDNA ITS sequences; taxonomy;
D O I
10.2323/jgam.53.133
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Forty-four Thai isolates phenotypically assigned to the genus Gluconobacter were examined for 16S-23S rDNA ITS restriction analysis by Mboll and Sdul (=Bsp1286I) digestions. The Thai isolates tested were divided into seven groups: Group I for fourteen isolates, Group IX for one isolate, Group X for two isolates, Group V-2 for four isolates, Group XI for three isolates, Group IV for one isolate, and Group III for nineteen isolates. There were no isolates of either Group 11 or Group V-1 that were identified as G. cerinus. The isolates of Group III, Group IV, and Group XI were subjected to an additional 16S-23S rDNA ITS restriction analysis by Avail, Taql, BsoBl, and BstNl digestions. The isolates of Group III were divided into three groups and two subgroups: Group III-2 for five isolates, Group III-6 for two isolates, and Group III-4, which was divided into two subgroups, Subgroup III-4a for four isolates and Subgroup III-4b for eight isolates. The fourteen isolates of Group I were identified as G. oxydans, and the two isolates of Group X were temporarily identified as G. oxydans. The five isolates of Group III-2 and the one isolate of Group IV were identified as G. frateurii. The remaining twenty-two isolates of Group V-2, Group III-4, Group III-6, Group IX, and Group XI were not identified but are candidates for several new species.
引用
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页码:133 / 142
页数:10
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