Estimating average cellular turnover from 5-bromo-2′-deoxyuridine (BrdU) measurements

被引:27
作者
De Boer, RJ
Mohri, H
Ho, DD
Perelson, AS
机构
[1] Univ Utrecht, Dept Theoret Biol, NL-3584 CH Utrecht, Netherlands
[2] Rockefeller Univ, Aaron Diamond AIDS Res Ctr, New York, NY 10016 USA
[3] Los Alamos Natl Lab, Div Theoret, Los Alamos, NM 87545 USA
关键词
5-bromo-2 '-deoxyuridine; parameter fitting; labelling; T lymphocyte; cellular proliferation; AIDS;
D O I
10.1098/rspb.2002.2316
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cellular turnover rates in the immune system can be determined by labelling dividing cells with 5-bromo-2'-deoxyuridine (BrdU) or deuterated glucose (2 H-glucose). To estimate the turnover rate from such measurements one has to fit a particular mathematical model to the data. The biological assumptions underlying various models developed for this purpose are controversial. Here, we fit a series of different models to BrdU data on CD4(+) T cells from SIV- and SIV+ rhesus macaques. We first show that the parameter estimates obtained using these models depend strongly on the details of the model. To resolve this lack of generality we introduce a new parameter for each model, the 'average turnover rate', defined as the cellular death rate averaged over all subpopulations in the model. We show that very different models yield similar estimates of the average turnover rate, i.e. ca. 1% day(-1) in uninfected monkeys and ca. 2% day(-1) in SIV-infected monkeys. Thus, we show that one can use BrdU data from a possibly heterogeneous population of cells to estimate the average turnover rate of that population in a robust manner.
引用
收藏
页码:849 / 858
页数:10
相关论文
共 36 条
[1]   Immunological memory and protective immunity: Understanding their relation [J].
Ahmed, R ;
Gray, D .
SCIENCE, 1996, 272 (5258) :54-60
[2]  
[Anonymous], 1999, SCIENCE, DOI DOI 10.1126/SCIENCE.284.5414.555A
[3]  
[Anonymous], 1986, Statistical Science, DOI [10.1214/ss/1177013815, DOI 10.1214/SS/1177013815]
[4]  
Armitage P., 2001, STAT METHODS MED RES, V4th
[5]   Lymphocyte kinetics: the interpretation of labelling data [J].
Asquith, B ;
Debacq, C ;
Macallan, DC ;
Willems, L ;
Bangham, CRM .
TRENDS IN IMMUNOLOGY, 2002, 23 (12) :596-601
[6]   Repeated antigen exposure is necessary for the differentiation, but not the initial proliferation, of naive CD4+ T cells [J].
Bajénoff, M ;
Wurtz, O ;
Guerder, S .
JOURNAL OF IMMUNOLOGY, 2002, 168 (04) :1723-1729
[7]   Quantification of cell turnover kinetics using 5-bromo-2′-deoxyuridine [J].
Bonhoeffer, S ;
Mohri, H ;
Ho, D ;
Perelson, AS .
JOURNAL OF IMMUNOLOGY, 2000, 164 (10) :5049-5054
[8]   Competition for antigenic sites during T cell proliferation:: A mathematical interpretation of in vitro data [J].
Borghans, JAM ;
Taams, LS ;
Wauben, MHM ;
de Boer, RJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (19) :10782-10787
[9]   T cell dynamics in HIV-1 infection [J].
Clark, DR ;
De Boer, RJ ;
Wolthers, KC ;
Miedema, F .
ADVANCES IN IMMUNOLOGY, VOL 73, 1999, 73 :301-327
[10]  
DEBOER RJ, 2003, IN PRESS J IMMUNOL