Preparation and characterisation of ribonuclease monolithic bioreactor

被引:24
作者
Bencina, Mojca
Babic, Janja
Podgornik, Ales
机构
[1] BIA Separat Doo, SI-1001 Ljubljana, Slovenia
[2] Natl Inst Chem, Biotechnol Lab, SI-1001 Ljubljana, Slovenia
关键词
immobilized ribonuclease (RNase); methacrylate monolith; convective interaction media CIM; epoxy; CDI; enzyme reactor;
D O I
10.1016/j.chroma.2006.12.083
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
In gene therapy and DNA vaccination, RNA removal from DNA preparations is vital and is typically achieved by the addition of ribonuclease into the sample. Removal of ribonuclease from DNA samples requires an additional purification step. An alternative is the implementation of immobilized ribonuclease. In our work, ribonuclease was covalently coupled onto the surface of methacrylate monoliths via epoxy or imidazole carbamate groups. Various immobilization conditions were tested by changing immobilization pH. Ribonuclease immobilized on the monolith via imidazole carbamate groups at pH 9 was found to be six times more active than the ribonuclease immobilized on the monolith via epoxy groups. Underoptimal immobilization conditions the Michaelis-Menten constant, K-m, for cytidine-2,3-cyclic monophosphate, and turnover number, k3 were 0.52 mM and 4.6 s(-1), respectively, and mirrored properties of free enzyme. Enzyme reactor was found to efficiently eliminate RNA contaminants from DNA samples. It was active for several weeks of operation and processed 300 column volumes of sample. Required residence time to eliminate RNA was estimated to be around 0.5 min enabling flow rates above I column volume per min. (c) 2007 Elsevier B.V All rights reserved.
引用
收藏
页码:135 / 142
页数:8
相关论文
共 35 条
[1]  
[Anonymous], 1989, Molecular Cloning
[2]  
Bailey J. E., 1986, BIOCH ENG FUNDAMENTA
[3]   Enzyme immobilization on epoxy- and 1,1′-carbonyldiimidazole-activated methacrylate-based monoliths [J].
Bencina, K ;
Podgornik, A ;
Strancar, A ;
Bencina, M .
JOURNAL OF SEPARATION SCIENCE, 2004, 27 (10-11) :811-818
[4]   Immobilization of deoxyribonuclease via epoxy groups of methacrylate monoliths - Use of deoxyribonuclease bioreactor in reverse transcription-polymerase chain reaction [J].
Bencina, M ;
Bencina, K ;
Strancar, A ;
Podgornik, A .
JOURNAL OF CHROMATOGRAPHY A, 2005, 1065 (01) :83-91
[5]   Characterization of methacrylate monoliths for purification of DNA molecules [J].
Bencina, M ;
Podgornik, A ;
Strancar, A .
JOURNAL OF SEPARATION SCIENCE, 2004, 27 (10-11) :801-810
[6]   Optimisation of multiple PCR using a combination of Full Factorial Design and three-dimensional Simplex optimisation method [J].
Bencina, M .
BIOTECHNOLOGY LETTERS, 2002, 24 (06) :489-495
[7]   Characterization and overexpression of the Aspergillus niger gene encoding the cAMP-dependent protein kinase catalytic subunit [J].
Bencina, M ;
Panneman, H ;
Ruijter, GJG ;
Legisa, M ;
Visser, J .
MICROBIOLOGY-SGM, 1997, 143 :1211-1220
[8]   Non-radioactive multiple reverse transcription-PCR method used for low abundance mRNA quantification [J].
Bencina, M ;
Legisa, M .
BIOTECHNOLOGY TECHNIQUES, 1999, 13 (12) :865-869
[9]  
Berruex L. G., 2002, METH TOOLS BIOSCI ME, P83
[10]   Role of the N terminus in RNase a homologues: Differences in catalytic activity, ribonuclease inhibitor interaction and cytotoxicity [J].
Boix, E ;
Wu, YN ;
Vasandani, VM ;
Saxena, SK ;
Ardelt, W ;
Ladner, J ;
Youle, RJ .
JOURNAL OF MOLECULAR BIOLOGY, 1996, 257 (05) :992-1007