Effect of charge interactions on the carboxylate vibrational stretching frequency in c-type cytochromes investigated by continuum electrostatic calculations and FTIR spectroscopy

The FTIR spectra of the asymmetric carboxylate absorption region of three c-type cytochromes-namely horse heart, yeast and bonito cytochromes c-as well as continuum electrostatic calculations performed on their respective protein matrices, show that these combined methods can target specific protein regions and yield pertinent protein charge information that correlates with the observed spectral data. Deconvolution of the TR carboxylate stretch frequency region (1525-1675 cm(-1)) in the three cytochromes yield different v(oco)(a) distributions. In the case of the bonito cytochrome c carboxylates, two upsilon(oco)(a) populations are clearly distinguishable in the deconvoluted spectra-which is not the case for the more complex upsilon(oco)(a) deconvolutions of the other two cytochromes. The frequency distributions of the calculated potentials are consistent with the experimental observations and we conclude that the IR carboxylate absorption in proteins can be modified by the electrostatic environment. (C) 1998 Elsevier Science B.V.