Serotyping of HIV type 1 infections: Definition, relationship to viral genetic subtypes, and assay evaluation

被引:49
作者
Cheingsong-Popov, R
Osmanov, S
Pau, CP
Schochetman, G
Barin, F
Holmes, H
Francis, G
Ruppach, H
Dietrich, U
Lister, S
Weber, J
机构
[1] Ctr Dis Control & Prevent, Div AIDS STD & TB Lab Res, Natl Ctr Infect Dis, Atlanta, GA 30333 USA
[2] Imperial Coll, Sch Med St Marys, Dept Genitourinary Med & Communicable Dis, London W2 1NY, England
[3] UNAIDS, CH-1211 Geneva, Switzerland
[4] Univ Tours, Dept Microbiol Med & Mol, F-37044 Tours, France
[5] Natl Inst Biol Stand & Controls, Potters Bar EN6 3QG, Herts, England
[6] Georg Speyer Haus, D-60596 Frankfurt, Germany
基金
英国惠康基金;
关键词
D O I
10.1089/aid.1998.14.311
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
V3 serotyping refers to a system based on binding of antibody in patient sera to V3-loop peptides derived from HIV-1 env genetic subtypes, The V3(X) serotype represents reactivity of serum from an HIV-1-infected patient (regardless of viral genetic subtype), which reacts preferentially to a V3 peptide derived from the X subtype sequence, We have classified HIV-1 serotypes, determined the relationship between the HIV-1 V3 serotypes and viral genetic subtypes in a large study (n = 125), and evaluated the performance of three different V3 peptide-binding assays, Seven HIV-1 V3 serotypes mere identified: A, B, B-Br, B-Th, C, D, and E, Serotypes B-Br and B-Th represent sera that react specifically to peptides derived from Brazilian B (B-Br, GWGR) and Thai B (B-Th, GPGQ) Strains, The HIV-1 V3 B, C, and E serotypes correlated Closely with their viral env genetic subtypes; 19-26 of 32 B sera (59-79%), 3-4 of 4 C sera (75-100%), and 19-22 of 23 E sera (83-96%) mere identified as serotypes B, C, and E, respectively, In contrast, two major V3 serotypes were classified in A sera: A (14-18 of 36 [40-50%]) and C (12-19 of 36 [33-54%]), Similarly, two major V3 serotypes were classified in D sera: B (6-10 of 20 [30-50%]) and D (9-12 of 20 [45-60%]), Serotyping of subtype E sera showed the best concordance with genetic subtypes by all assays, Overall, HIV-1 V3 serotyping produced consistent results among three laboratories, However, HIV-1 V3 serotypes do not distinguish all HIV-1 genetic subtypes, The relative biological significance of the V3 serotypes remains to be elucidated.
引用
收藏
页码:311 / 318
页数:8
相关论文
共 37 条
[1]   HIV-1 subtype B in West Africa [J].
Ariyoshi, K ;
CheingsongPopov, R ;
Wilkins, A ;
Corrah, T ;
Weber, J ;
Whittle, H .
LANCET, 1996, 347 (8997) :328-328
[2]   Diversity of antibody binding to V3 peptides representing consensus sequences of HIV type 1 genotypes A to E: An approach for HIV type 1 serological subtyping [J].
Barin, F ;
Lahbabi, Y ;
Buzelay, L ;
Lejeune, B ;
BaillouBeaufils, A ;
Denis, F ;
Mathiot, C ;
MBoup, S ;
Vithayasai, V ;
Dietrich, U ;
Goudeau, A .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 1996, 12 (13) :1279-1289
[3]   Genetic heterogeneity of HIV type 1 in Russia: Identification of H variants and relationship with epidemiological data [J].
Bobkov, A ;
CheingsongPopov, R ;
Selimova, L ;
Kazennova, E ;
Karasyova, N ;
Kravchenko, A ;
Ladnaya, N ;
Pokrovsky, V ;
Weber, J .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 1996, 12 (18) :1687-1690
[4]   DETECTION OF DIVERSE HIV-1 GENETIC SUBTYPES IN THE USA [J].
BRODINE, SK ;
MASCOLA, JR ;
WEISS, PJ ;
ITO, SI ;
PORTER, KR ;
ARTENSTEIN, AW ;
GARLAND, FC ;
MCCUTCHAN, FE ;
BURKE, DS .
LANCET, 1995, 346 (8984) :1198-1199
[5]  
CALLOW D, 1992, 8 INT C AIDS AMST JU
[6]   MOLECULAR EPIDEMIOLOGY OF RESPIRATORY SYNCYTIAL VIRUS - A REVIEW OF THE USE OF REVERSE TRANSCRIPTION-POLYMERASE CHAIN-REACTION IN THE ANALYSIS OF GENETIC-VARIABILITY [J].
CANE, PA ;
PRINGLE, CR .
ELECTROPHORESIS, 1995, 16 (03) :329-333
[7]   IDENTIFICATION OF HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 SUBTYPES AND THEIR DISTRIBUTION IN THE COMMONWEALTH-OF-INDEPENDENT-STATES (FORMER SOVIET-UNION) BY SEROLOGIC V3 PEPTIDE-BINDING ASSAYS AND V3 SEQUENCE-ANALYSIS [J].
CHEINGSONGPOPOV, R ;
BOBKOV, A ;
GARAEV, MM ;
KALEEBU, P ;
CALLOW, D ;
RZHIMINOVA, A ;
SAUKHAT, SR ;
BURDAJEV, NP ;
KOLOMIJETS, ND ;
WEBER, JN .
JOURNAL OF INFECTIOUS DISEASES, 1993, 168 (02) :292-297
[8]   SEROTYPING HIV TYPE-1 BY ANTIBODY-BINDING TO THE V3 LOOP - RELATIONSHIP TO VIRAL GENOTYPE [J].
CHEINGSONGPOPOV, R ;
LISTER, S ;
CALLOW, D ;
KALEEBU, P ;
BEDDOWS, S ;
WEBER, J ;
OSMANOV, S ;
BELSEY, EM ;
HEYWARD, W ;
ESPARZA, J ;
GALVAOCASTRO, B ;
VANDEPERRE, P ;
KARITA, E ;
WASI, C ;
SEMPALA, S ;
TUGUME, B ;
BIRYAHWAHO, B ;
RUBSAMENWAIGMANN, H ;
VONBRIESEN, H ;
ESSER, R ;
GREZ, M ;
HOLMES, H ;
NEWBERRY, A ;
RANJBAR, S ;
TOMLINSON, P ;
BRADAC, J ;
MCCUTCHAN, F ;
LOUWAGIE, J ;
HEGERICH, P ;
LOPEZGALINDEZ, C ;
OLIVARES, I ;
DOPAZO, J ;
MULLINS, JI ;
DELWART, EL ;
BACHMANN, HM ;
GOUDSMIT, J ;
DEWOLF, F ;
HAHN, BH ;
GAO, F ;
YUE, L ;
SARAGOSTI, S ;
SCHOCHETMAN, G ;
KALISH, M ;
LUO, CC ;
GEORGE, R ;
PAU, CP ;
NARA, P ;
FENYO, EM ;
ALBERT, J ;
MYERS, G .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 1994, 10 (11) :1379-1386
[9]  
CHEINGSONGPOPOV R, 1998, IN PRESS AIDS
[10]   GENETIC-RELATIONSHIPS DETERMINED BY A DNA HETERODUPLEX MOBILITY ASSAY - ANALYSIS OF HIV-1 ENV GENES [J].
DELWART, EL ;
SHPAER, EG ;
LOUWAGIE, J ;
MCCUTCHAN, FE ;
GREZ, M ;
RUBSAMENWAIGMANN, H ;
MULLINS, JI .
SCIENCE, 1993, 262 (5137) :1257-1261