Genomic structure and expression of parathyroid hormone-related protein gene (PTHrP) in a teleost, Fugu rubripes

被引:47
作者
Power, DM
Ingleton, PM
Flanagan, J
Canario, AVM
Danks, J
Elgar, G
Clark, MS
机构
[1] Fugu Genom, HGMP Resource Ctr, Cambridge CB10 1SB, England
[2] Univ Algarve, Ctr Ciencias MAR, P-8000810 Faro, Portugal
[3] Univ Sheffield, Inst Endocrinol, Div Musculoskeletal Med, Sheffield S10 2RX, S Yorkshire, England
[4] St Vincents Hosp, St Vincents Inst Med Res, Fitzroy, Vic 3065, Australia
基金
英国医学研究理事会;
关键词
hypercalcaemia; PTH; synteny; vertebrate;
D O I
10.1016/S0378-1119(00)00167-0
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this study we describe the isolation and characterisation of the parathyroid hormone-related protein (PTHrP) gene from the teleost Fugu rubripes. The gene has a relatively simple structure, compared with tetrapod PTHrP genes, composed of three exons and two introns, encompassing 2.25 kb of genomic DNA. The gene encodes a protein of 163 amino acids, with a putative signal peptide of 37 amino acids and a mature peptide of 126 amino acids. The overall homology with known tetrapod PTHrP proteins is low (36%), with a novel sequence inserted between positions 38 and 65, the absence of the conserved pentapeptide (TRSAW) and shortened C-terminal domain. The N-terminus shows greater conservation (62%), suggesting that it may have a hypercalcaemic function similar to that of tetrapod PTHrP. In situ localisation and RT-PCR have demonstrated the presence of PTHrP in a wide range of tissues with varying levels of expression. Sequence scanning of overlapping cosmids has identified three additional genes, TMPO, LDHB and KCNA1, which map to human chromosome 12, with the latter two mapping to 12p12-11.2. PTHrP in human also maps to this chromosome 12 sub-region, thus demonstrating conservation of synteny between human and Fugu. (C) 2000 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:67 / 76
页数:10
相关论文
共 39 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   The SWISS-PROT protein sequence data bank and its supplement TrEMBL [J].
Bairoch, A ;
Apweller, R .
NUCLEIC ACIDS RESEARCH, 1997, 25 (01) :31-36
[3]   A new DNA sequence assembly program [J].
Bonfield, JK ;
Smith, KF ;
Staden, R .
NUCLEIC ACIDS RESEARCH, 1995, 23 (24) :4992-4999
[4]   Experiment files and their application during large-scale sequencing projects [J].
Bonfield, JK ;
Staden, R .
DNA SEQUENCE, 1996, 6 (02) :109-117
[5]  
BURTIS WJ, 1987, J BIOL CHEM, V262, P7151
[6]   EVIDENCE FOR ANCIENT TETRAPLOIDY AND CONSERVATION OF LINKAGE GROUPS IN MAMMALIAN CHROMOSOMES [J].
COMINGS, DE .
NATURE, 1972, 238 (5365) :455-&
[7]   PARATHYROID HORMONE-RELATED PROTEIN IS A FACTOR IN NORMAL FISH PITUITARY [J].
DANKS, JA ;
DEVLIN, AJ ;
HO, PMW ;
DIEFENBACHJAGGER, H ;
POWER, DM ;
CANARIO, A ;
MARTIN, TJ ;
INGLETON, PM .
GENERAL AND COMPARATIVE ENDOCRINOLOGY, 1993, 92 (02) :201-212
[8]   Immunochemical detection of parathyroid hormone-related protein in the saccus vasculosus of a teleost fish [J].
Devlin, AJ ;
Danks, JA ;
Faulkner, MK ;
Power, DM ;
Canario, AVM ;
Martin, TJ ;
Ingleton, PM .
GENERAL AND COMPARATIVE ENDOCRINOLOGY, 1996, 101 (01) :83-90
[9]   ABUNDANT EXPRESSION OF PARATHYROID HORMONE-RELATED PROTEIN IN HUMAN AMNION AND ITS ASSOCIATION WITH LABOR [J].
FERGUSON, JE ;
GORMAN, JV ;
BRUNS, DE ;
WEIR, EC ;
BURTIS, WJ ;
MARTIN, TJ ;
BRUNS, ME .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (17) :8384-8388
[10]  
FLANAGAN JA, 2000, IN PRESS GEN COMP EN