Symbiobacterium thermophilum gen. nov., sp nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth

被引:74
作者
Ohno, M
Shiratori, H
Park, MJ
Saitoh, Y
Kumon, Y
Yamashita, N
Hirata, A
Nishida, H
Ueda, K
Beppu, T [1 ]
机构
[1] Nihon Univ, Dept Appl Biol Sci, Fujisawa, Kanagawa 2528510, Japan
[2] Univ Tokyo, Inst Mol & Cellular Biol, Bunkyo Ku, Tokyo 1138657, Japan
关键词
Symbiobacterium thermophilum; 16S rDNA; tryptophanase; high-G plus C Gram-positive bacteria;
D O I
10.1099/00207713-50-5-1829
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-negative and tryptophanase-positive thermophile, whose growth is dependent on co-culture with an associating Bacillus strain, had been reported and tentatively named Symbiobacterium thermophilum strain T-T. Axenic culture of strain T-T was recently established by dialysing cultures with the supporting bacterial strains or adding their culture broth. Phylogenetic analysis of strain T-T, based on the 16S rDNA sequence, was conducted for the validation of S. thermophilum, the sequence of strain T-T was located at the outermost position in the high-G+C Gram-positive group distinctly isolated from any other branches hitherto known. Ten sequences identical to that of strain T-T, and one sequence closely related to it, were identified for the first time from soil and compost samples. The outer membrane of strain T-T had a three-layered structure, outside the cytoplasmic membrane, which is similar to the S-layer in the cells of members of the Bacillaceae. Chemical analysis of the cells revealed that menaquinone-6 is a major component of the quinone system. According to these results, along with several previous observations (i.e. a G+C DNA content of 65 mol% and the identification of iso-C-15:0 and iso-C-17:0 acids as major cellular fatty acids), the new taxon Symbiobacterium thermophilum gen, nov., sp. nov. is proposed. The type strain is S. thermophilum strain T-T (= IAM 14863(T)).
引用
收藏
页码:1829 / 1832
页数:4
相关论文
共 12 条
[1]   A NOTE ON THE SEPARATION OF NATURAL MIXTURES OF BACTERIAL UBIQUINONES USING REVERSE-PHASE PARTITION THIN-LAYER CHROMATOGRAPHY AND HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY [J].
COLLINS, MD ;
JONES, D .
JOURNAL OF APPLIED BACTERIOLOGY, 1981, 51 (01) :129-134
[2]   A NOTE ON THE SEPARATION OF NATURAL MIXTURES OF BACTERIAL MENAQUINONES USING REVERSE PHASE THIN-LAYER CHROMATOGRAPHY [J].
COLLINS, MD ;
SHAH, HN ;
MINNIKIN, DE .
JOURNAL OF APPLIED BACTERIOLOGY, 1980, 48 (02) :277-282
[3]   EVOLUTIONARY TREES FROM DNA-SEQUENCES - A MAXIMUM-LIKELIHOOD APPROACH [J].
FELSENSTEIN, J .
JOURNAL OF MOLECULAR EVOLUTION, 1981, 17 (06) :368-376
[4]   A regulatory system hitherto found only in Gram-positive bacteria in a Gram-negative bacterium that grows only in co-culture with a Bacillus strain [J].
Grundy, FJ ;
Henkin, TM .
MOLECULAR MICROBIOLOGY, 1999, 33 (03) :667-668
[5]   CLONING, NUCLEOTIDE-SEQUENCES, AND OVEREXPRESSION IN ESCHERICHIA-COLI OF TANDEM COPIES OF A TRYPTOPHANASE GENE IN AN OBLIGATELY SYMBIOTIC THERMOPHILE, SYMBIOBACTERIUM-THERMOPHILUM [J].
HIRAHARA, T ;
SUZUKI, S ;
HORINOUCHI, S ;
BEPPU, T .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1992, 58 (08) :2633-2642
[6]   CLONING, NUCLEOTIDE-SEQUENCE, AND OVEREXPRESSION IN ESCHERICHIA-COLI OF THE BETA-TYROSINASE GENE FROM AN OBLIGATELY SYMBIOTIC THERMOPHILE, SYMBIOBACTERIUM-THERMOPHILUM [J].
HIRAHARA, T ;
HORINOUCHI, S ;
BEPPU, T .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 1993, 39 (03) :341-346
[7]   Thermostable tyrosine phenol-lyase of Symbiobacterium sp. SC-1:: Gene cloning, sequence determination, and overproduction in Escherichia coli [J].
Lee, SG ;
Hong, SP ;
Choi, YH ;
Chung, YJ ;
Sung, MH .
PROTEIN EXPRESSION AND PURIFICATION, 1997, 11 (03) :263-270
[8]   Establishing the independent culture of a strictly symbiotic bacterium Symbiobacterium thermophilum from its supporting Bacillus strain [J].
Ohno, M ;
Okano, I ;
Watsuji, TO ;
Kakinuma, T ;
Ueda, K ;
Beppu, T .
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 1999, 63 (06) :1083-1090
[9]   PURIFICATION AND PROPERTIES OF THERMOSTABLE BETA-TYROSINASE FROM AN OBLIGATELY SYMBIOTIC THERMOPHILE, SYMBIOBACTERIUM-THERMOPHILUM [J].
SUZUKI, S ;
HIRAHARA, T ;
SHIM, JK ;
HORINOUCHI, S ;
BEPPU, T .
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 1992, 56 (01) :84-89
[10]   PURIFICATION AND PROPERTIES OF THERMOSTABLE TRYPTOPHANASE FROM AN OBLIGATELY SYMBIOTIC THERMOPHILE, SYMBIOBACTERIUM-THERMOPHILUM [J].
SUZUKI, S ;
HIRAHARA, T ;
HORINOUCHI, S ;
BEPPU, T .
AGRICULTURAL AND BIOLOGICAL CHEMISTRY, 1991, 55 (12) :3059-3066