Cloning, sequence and crystallographic structure of recombinant iron superoxide dismutase from Pseudomonas ovalis

被引:9
作者
Bond, CJ
Huang, JY
Hajduk, R
Flick, KE
Heath, PJ
Stoddard, BL
机构
[1] Fred Hutchinson Canc Res Ctr, Program Struct Biol, Div Basic Sci, Seattle, WA 98109 USA
[2] Univ Washington, Program Biomol Struct & Design, Seattle, WA 98195 USA
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 2000年 / 56卷
关键词
D O I
10.1107/S0907444900009537
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The gene encoding the iron-dependent superoxide dismutase from Pseudomonas ovalis was cloned from a genomic library and sequenced. The ORF differs from the previously published protein sequence, which was used for the original structure determination, at 16 positions. The differences include three additional inserted residues, one deleted residue and 12 point substitutions. The gene was subcloned and the recombinant protein overexpressed, purified and crystallized in a trigonal space group. The structure was determined by molecular replacement and was refined to 2.1 Angstrom resolution.
引用
收藏
页码:1359 / 1366
页数:8
相关论文
共 31 条
[1]  
ASADA K, 1975, J BIOL CHEM, V250, P2801
[2]   Cryo-trapping the six-coordinate, distorted-octahedral active site of manganese superoxide dismutase [J].
Borgstahl, GEO ;
Pokross, M ;
Chehab, R ;
Sekher, A ;
Snell, EH .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 296 (04) :951-959
[3]  
Brunger AT., 1993, X PLOR VERSION 3 1 S
[4]   Engineering a change in metal-ion specificity of the iron-dependent superoxide dismutase from Mycobacterium tuberculosis X-Ray structure analysis of site-directed mutants [J].
Bunting, K ;
Cooper, JB ;
Badasso, MO ;
Tickle, IJ ;
Newton, M ;
Wood, SP ;
Zhang, Y ;
Young, D .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1998, 251 (03) :795-803
[5]   ISOLATION OF SUPEROXIDE-DISMUTASE MUTANTS IN ESCHERICHIA-COLI - IS SUPEROXIDE-DISMUTASE NECESSARY FOR AEROBIC LIFE [J].
CARLIOZ, A ;
TOUATI, D .
EMBO JOURNAL, 1986, 5 (03) :623-630
[6]   X-RAY STRUCTURE-ANALYSIS OF THE IRON-DEPENDENT SUPEROXIDE-DISMUTASE FROM MYCOBACTERIUM-TUBERCULOSIS AT 2.0-ANGSTROMS RESOLUTION REVEALS NOVEL DIMER-DIMER INTERACTIONS [J].
COOPER, JB ;
MCINTYRE, K ;
BADASSO, MO ;
WOOD, SP ;
ZHANG, Y ;
GARBE, TR ;
YOUNG, D .
JOURNAL OF MOLECULAR BIOLOGY, 1995, 246 (04) :531-544
[7]   SUPEROXIDE DISMUTASES [J].
FRIDOVICH, I .
ANNUAL REVIEW OF BIOCHEMISTRY, 1975, 44 :147-159
[8]  
FRIDOVICH I, 1995, ANNU REV BIOCHEM, V64, P64
[9]   Crystal structure of Y34F mutant human mitochondrial manganese superoxide dismutase and the functional role of tyrosine 34 [J].
Guan, Y ;
Hickey, MJ ;
Borgstahl, GEO ;
Hallewell, RA ;
Lepock, JR ;
O'Connor, D ;
Hsieh, YS ;
Nick, HS ;
Silverman, DN ;
Tainer, JA .
BIOCHEMISTRY, 1998, 37 (14) :4722-4730
[10]   Probing the active site of human manganese superoxide dismutase: The role of glutamine 143 [J].
Hsieh, YS ;
Guan, Y ;
Tu, CK ;
Bratt, PJ ;
Angerhofer, A ;
Lepock, JR ;
Hickey, MJ ;
Tainer, JA ;
Nick, HS ;
Silverman, DN .
BIOCHEMISTRY, 1998, 37 (14) :4731-4739