Investigation on response of the metabolites in tricarboxylic acid cycle of Escherichi coli and Pseudomonas aeruginosa to antibiotic perturbation by capillary electrophoresis

被引:17
作者
Gao, Peng [1 ]
Shi, Chunyun [1 ]
Tian, Jing [1 ]
Shi, Xianzhe [1 ]
Yuan, Kailong [1 ]
Lu, Xin [1 ]
Xu, Guowang [1 ]
机构
[1] Chinese Acad Sci, Dalian Inst Chem Phys, Natl Chromatog R&A Ctr, Dalian 116023, Peoples R China
基金
中国国家自然科学基金;
关键词
capillary electrophoresis; tricarboxylic acid cycle; carboxylic acids; antibiotic;
D O I
10.1016/j.jpba.2007.02.015
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Metabolomics is a new branch of systems biology exerting its influence in many aspects. In order to appraise the effects of antibiotics on central carbon metabolism, a CE based method was set up. With this platform, we estimated the organic acid metabolite pools' fluctuation of Escherichia coli and Pseudomonas aeruginosa cultured under 11 different antibiotics' stimuli. Multivariate data analysis showed that different antibiotics had clustered distributions for each strain and could be easily distinguished. Genetic, metabolic and antibiotic mechanism differences could also be deduced by the aid of further correlation analysis. For P. aeruginosa, even synergy action amid antibiotics could be ascertained. (c) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:180 / 187
页数:8
相关论文
共 30 条
[1]  
[Anonymous], [No title captured]
[2]   Discrimination of pathogenic clinical isolates and laboratory strains of Bacillus cereus by NMR-based metabolomic profiling [J].
Bundy, JG ;
Willey, TL ;
Castell, RS ;
Ellar, DJ ;
Brindle, KM .
FEMS MICROBIOLOGY LETTERS, 2005, 242 (01) :127-136
[3]  
Duez P, 1996, CLIN CHEM, V42, P1609
[4]   Long-term anaerobic survival of the opportunistic pathogen Pseudomonas aeruginosa via pyruvate fermentation [J].
Eschbach, M ;
Schreiber, K ;
Trunk, K ;
Buer, J ;
Jahn, D ;
Schobert, M .
JOURNAL OF BACTERIOLOGY, 2004, 186 (14) :4596-4604
[5]   Metabolomics - the link between genotypes and phenotypes [J].
Fiehn, O .
PLANT MOLECULAR BIOLOGY, 2002, 48 (1-2) :155-171
[6]   Bioanalysis in microfluidic devices [J].
Khandurina, J ;
Guttman, A .
JOURNAL OF CHROMATOGRAPHY A, 2002, 943 (02) :159-183
[7]   Microbial metabolomics with gas chromatography/mass spectrometry [J].
Koek, MM ;
Muilwijk, B ;
van der Werf, MJ ;
Hankemeier, T .
ANALYTICAL CHEMISTRY, 2006, 78 (04) :1272-1281
[8]   Development of an HPLC-fluorescence determination method for carboxylic acids related to the tricarboxylic acid cycle as a metabolome tool [J].
Kubota, K ;
Fukushima, T ;
Yuji, R ;
Miyano, H ;
Hirayama, K ;
Santa, T ;
Imai, K .
BIOMEDICAL CHROMATOGRAPHY, 2005, 19 (10) :788-795
[9]   Application of comprehensive two-dimensional gas chromatography to drugs analysis in doping control [J].
Kueh, AJ ;
Marriott, PJ ;
Wynne, PM ;
Vine, JH .
JOURNAL OF CHROMATOGRAPHY A, 2003, 1000 (1-2) :109-124
[10]  
Kunkel A, 1999, ARCH PHARM, V332, P175, DOI 10.1002/(SICI)1521-4184(19995)332:5<175::AID-ARDP175>3.3.CO