High-throughput film-densitometry: an efficient approach to generate large data sets

被引:14
作者
Typke, D
Nordmeyer, RA
Jones, A
Lee, JY
Avila-Sakar, A
Downing, KH
Glaeser, RM [1 ]
机构
[1] Univ Calif Berkeley, Lawrence Berkeley Lab, Div Life Sci, Donner Lab, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Lawrence Berkeley Lab, Dept Engn, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
关键词
electron microscopy; film densitometer; film-handling robot; Nikon Super Coolscan S000 ED; modulation transfer function; MTF; Wiener filter; signal-to-noise ratio; geometric distortions;
D O I
10.1016/j.jsb.2004.09.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A film-handling machine (robot) has been built which can, in conjunction with a commercially available film densitometer. exchange and digitize over 300 electron micrographs per day. Implementation of robotic film handling effectively eliminates the delay and tedium associated with digitizing images when data are initially recorded on photographic film. The modulation transfer function (MTF) of the commercially available densitometer is significantly worse than that of a high-end. scientific microdensitometer. Nevertheless, its signal-to-noise ratio (S/N) is quite excellent, allowing substantial restoration of the output to "near-to-perfect" performance. Due to the large area of the standard electron microscope film that can be digitized by the commercial densitometer (up to 10,000 x 13,680 pixels with an appropriately coded holder), automated film digitization offers a fast and inexpensive alternative to high-end CCD cameras as a means of acquiring large amounts of image data in electron microscopy. Published by Elsevier Inc.
引用
收藏
页码:17 / 29
页数:13
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