The gamma-aminobutyric acid type A (GABA(A)) receptor is a transmitter-gated ion channel mediating the majority of fast inhibitory synaptic transmission within the brain, The receptor is a pentameric assembly of subunits drain from multiple classes (alpha(1-6), beta(1-3), gamma(1-3), delta(1), and epsilon(1)), Positive allosteric modulation of GABA(A) receptor activity by general anesthetics represents one logical mechanism for central nervous system depression, The ability of the intravenous general anesthetic etomidate to modulate and activate GABA(A) receptors is uniquely dependent upon the beta subunit subtype present within the receptor, Receptors containing beta(2)- or beta(3)-, but not beta(1) subunits, are highly sensitive to the agent, Here, chimeric beta(1)/beta(2) subunits coexpressed in Xenopus laevis oocytes with human alpha(6) and gamma(2) subunits identified a region distal to the extracellular N-terminal domain as a determinant of the selectivity of etomidate, The mutation of an amino acid (Asn-289) present within the channel domain of the beta(3) subunit to Ser (the homologous residue in beta(1)), strongly suppressed the GABA-modulatory and GABA mimetic effects of etomidate, The replacement of the beta(1) subunit Ser-290 by Asn produced the converse effect, When applied intracellularly to mouse L(tk-) cells stably expressing the alpha(6) beta(3) gamma(2) subunit combination, etomidate was inert. Hence, the effects of a clinically utilized general anesthetic upon a physiologically relevant target protein are dramatically influenced by a single amino acid. Together with the lack of effect of intracellular etomidate, the data argue against a unitary, lipid-based theory of anesthesia.