Fish possess multiple copies of fgfrll, the gene for a novel FGF receptor

被引:22
作者
Trueb, B
Neuhauss, SCF
Baertschi, S
Rieckmann, T
Schild, C
Taeschler, S
机构
[1] Univ Bern, ITI Res Inst, CH-3010 Bern, Switzerland
[2] Swiss Fed Inst Technol, Dept Biol, CH-8057 Zurich, Switzerland
[3] Univ Zurich, Inst Brain Res, CH-8057 Zurich, Switzerland
来源
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION | 2005年 / 1727卷 / 01期
关键词
Danio rerio; fibroblast growth factor receptor; FGFR; Fugu rubripes; whole-genome duplication; zebrafish;
D O I
10.1016/j.bbaexp.2004.12.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
FGFRL1 is a novel FGF receptor that lacks the intracellular tyrosine kinase domain. While mammals, including man and mouse, possess a single copy of the FGFRL1 gene, fish have at least two copies, fgfrl1a and fgfrl1b. In zebrafish, both genes are located on chromosome 14, separated by about 10 cM. The two genes show a similar expression pattern in several zebrafish tissues, although the expression of fgfrl1b appears to be weaker than that of fgfrl1a. A clear difference is observed in the ovary of Fugu rubripes, which expresses fgfrl1a but not fgfrl1b. It is therefore possible that subfunctionalization has played a role in maintaining the two fgfrl1 genes during the evolution of fish. In human beings, the FGFRL1 gene is located on chromosome 4, adjacent to the SPON2, CTBP1 and MEAEA genes. These genes are also found adjacent to the fgfrl1a gene of Fugu, suggesting that FGFRL1, SPON2, CTBP1 and MEAEA were preserved as a coherent block during the evolution of Fugu and man. (C) 2004 Elsevier B.V All rights reserved.
引用
收藏
页码:65 / 74
页数:10
相关论文
共 25 条
[1]   Zebrafish hox clusters and vertebrate genome evolution [J].
Amores, A ;
Force, A ;
Yan, YL ;
Joly, L ;
Amemiya, C ;
Fritz, A ;
Ho, RK ;
Langeland, J ;
Prince, V ;
Wang, YL ;
Westerfield, M ;
Ekker, M ;
Postlethwait, JH .
SCIENCE, 1998, 282 (5394) :1711-1714
[2]  
Ausubel F.M., 1994, CURRENT PROTOCOLS MO
[3]  
CHOMCZYNSKI P, 1987, ANAL BIOCHEM, V162, P156, DOI 10.1016/0003-2697(87)90021-2
[4]   Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes [J].
Christoffels, A ;
Koh, EGL ;
Chia, JM ;
Brenner, S ;
Aparicio, S ;
Venkatesh, B .
MOLECULAR BIOLOGY AND EVOLUTION, 2004, 21 (06) :1146-1151
[5]   Fugu ESTs:: New resources for transcription analysis and genome annotation [J].
Clark, MS ;
Edwards, YJK ;
Peterson, D ;
Clifton, SW ;
Thompson, AJ ;
Sasaki, M ;
Suzuki, Y ;
Kikuchi, K ;
Watabe, S ;
Kawakami, K ;
Sugano, S ;
Elgar, G ;
Johnson, SL .
GENOME RESEARCH, 2003, 13 (12) :2747-2753
[6]   Genome evolution in yeasts [J].
Dujon, B ;
Sherman, D ;
Fischer, G ;
Durrens, P ;
Casaregola, S ;
Lafontaine, I ;
de Montigny, J ;
Marck, C ;
Neuvéglise, C ;
Talla, E ;
Goffard, N ;
Frangeul, L ;
Aigle, M ;
Anthouard, V ;
Babour, A ;
Barbe, V ;
Barnay, S ;
Blanchin, S ;
Beckerich, JM ;
Beyne, E ;
Bleykasten, C ;
Boisramé, A ;
Boyer, J ;
Cattolico, L ;
Confanioleri, F ;
de Daruvar, A ;
Despons, L ;
Fabre, E ;
Fairhead, C ;
Ferry-Dumazet, H ;
Groppi, A ;
Hantraye, F ;
Hennequin, C ;
Jauniaux, N ;
Joyet, P ;
Kachouri, R ;
Kerrest, A ;
Koszul, R ;
Lemaire, M ;
Lesur, I ;
Ma, L ;
Muller, H ;
Nicaud, JM ;
Nikolski, M ;
Oztas, S ;
Ozier-Kalogeropoulos, O ;
Pellenz, S ;
Potier, S ;
Richard, GF ;
Straub, ML .
NATURE, 2004, 430 (6995) :35-44
[7]   A TECHNIQUE FOR RADIOLABELING DNA RESTRICTION ENDONUCLEASE FRAGMENTS TO HIGH SPECIFIC ACTIVITY [J].
FEINBERG, AP ;
VOGELSTEIN, B .
ANALYTICAL BIOCHEMISTRY, 1983, 132 (01) :6-13
[8]  
Force A, 1999, GENETICS, V151, P1531
[9]   A Fugu-Human Genome Synteny Viewer: web software for graphical display and annotation reports of synteny between Fugu genomic sequence and human genes [J].
Halling-Brown, M ;
Sansom, C ;
Moss, DS ;
Elgar, G ;
Edwards, YJK .
NUCLEIC ACIDS RESEARCH, 2004, 32 (08) :2618-2622
[10]   The LN54 radiation hybrid map of zebrafish expressed sequences [J].
Hukriede, N ;
Fisher, D ;
Epstein, J ;
Joly, L ;
Tellis, P ;
Zhou, Y ;
Barbazuk, B ;
Cox, K ;
Fenton-Noriega, L ;
Hersey, C ;
Miles, J ;
Sheng, XM ;
Song, A ;
Waterman, R ;
Johnson, SL ;
Dawid, IB ;
Chevrette, M ;
Zon, LI ;
McPherson, J ;
Ekker, M .
GENOME RESEARCH, 2001, 11 (12) :2127-2132