Nodularia sp nifH gene transcripts in the Baltic Sea proper

被引:19
作者
Bostrom, Kjarstin H. [1 ]
Riemann, Lasse [1 ]
Zweifel, Ulla Li [1 ]
Hagstrom, Ake [1 ]
机构
[1] Kalmar Univ, S-39182 Kalmar, Sweden
关键词
D O I
10.1093/plankt/fbm019
中图分类号
Q17 [水生生物学];
学科分类号
071004 ;
摘要
Nitrogen fixation contributes significantly to the nitrogen input to the Baltic Sea. To develop a better understanding of the dynamics of plankton productivity, it is important to identify the N-2-fixing organisms and to determine their activity and distribution. In the Baltic Sea proper, we identified two cyanobacteria, Nodularia and Aphanizomenon, as the main nitrogenase-transcribing organisms in surface waters (4 m) based upon a library of 84 nitrogenase gene (nifH) clones. Using a quantitative species-specific real-time PCR protocol, Nodularia nifH gene transcription was found to be temporally and spatially variable with a strong peak at early to mid day and large variations at a single station over periods of months. The highest Nodularia nifH transcript concentration was observed in July (3.4 x 10(6) nifH copies L-1). Large variations were observed between stations, presumably due to patchiness of Nodularia biomass and variations in the exact day time of sampling. Rapid quantification of nitrogenase transcripts at the species level represents an important advancement for research concerning the distribution and regulation of planktonic cyanobacterial N-2-fixation.
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收藏
页码:391 / 399
页数:9
相关论文
共 29 条
[1]   A molecular and phenotypic analysis of Nodularia (cyanobacteria) from the Baltic Sea [J].
Barker, GLA ;
Hayes, PK ;
O'Mahony, SL ;
Vacharapiyasophon, P ;
Walsby, AE .
JOURNAL OF PHYCOLOGY, 1999, 35 (05) :931-937
[2]   Spatial distribution and transcriptional activity of an uncultured clade of planktonic diazotrophic γ-proteobacteria in the Arabian Sea [J].
Bird, C ;
Martinez, JM ;
O'Donnell, AG ;
Wyman, M .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (04) :2079-2085
[3]   Isolation and gene quantification of heterotrophic N2-fixing bacterioplankton in the Baltic Sea [J].
Bostrom, Kjarstin H. ;
Riemann, Lasse ;
Kuhl, Michael ;
Hagstrom, Ake .
ENVIRONMENTAL MICROBIOLOGY, 2007, 9 (01) :152-164
[4]   Vertical distributions of nitrogen-fixing phylotypes at Stn ALOHA in the oligotrophic North Pacific Ocean [J].
Church, MJ ;
Jenkins, BD ;
Karl, DM ;
Zehr, JP .
AQUATIC MICROBIAL ECOLOGY, 2005, 38 (01) :3-14
[5]   Temporal patterns of nitrogenase gene (nifH) expression in the oligotrophic North Pacific Ocean [J].
Church, MJ ;
Short, CM ;
Jenkins, BD ;
Karl, DM ;
Zehr, JP .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (09) :5362-5370
[6]   Nitrogen fixation by Baltic cyanobacteria is adapted to the prevailing photon flux density [J].
Evans, AM ;
Gallon, JR ;
Jones, A ;
Staal, M ;
Stal, LJ ;
Villbrandt, M ;
Walton, TJ .
NEW PHYTOLOGIST, 2000, 147 (02) :285-297
[7]   Maximum rates of N2 fixation and primary production are out of phase in a developing cyanobacterial bloom in the Baltic Sea [J].
Gallon, JR ;
Evans, AM ;
Jones, DA ;
Albertano, P ;
Congestri, R ;
Bergman, B ;
Gundersen, K ;
Orcutt, KM ;
von Brockel, K ;
Fritsche, P ;
Meyerhofer, M ;
Nachtigall, K ;
Ohlendieck, U ;
Hekkert, STL ;
Sivonen, K ;
Repka, S ;
Stal, LJ ;
Staal, M .
LIMNOLOGY AND OCEANOGRAPHY, 2002, 47 (05) :1514-1521
[8]   Contamination of diverse nifH and nifH-like DNA into commercial PCR primers [J].
Goto, M ;
Ando, S ;
Hachisuka, Y ;
Yoneyama, T .
FEMS MICROBIOLOGY LETTERS, 2005, 246 (01) :33-38
[9]  
GRANELI E, 1990, AMBIO, V19, P142
[10]  
Janson S, 2002, INT J SYST EVOL MICR, V52, P1397, DOI [10.1099/ijs.0.02111-0, 10.1099/00207713-52-4-1397]