Bacterial microbiome of breast milk and child saliva from low-income Mexican-American women and children

被引:50
作者
Dave, Veronica [1 ]
Street, Kelly [1 ]
Francis, Stephen [1 ]
Bradman, Asa [1 ,2 ]
Riley, Lee [1 ]
Eskenazi, Brenda [1 ,2 ]
Holland, Nina [1 ,2 ]
机构
[1] Univ Calif Berkeley, Sch Publ Hlth, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Sch Publ Hlth, CERCH, Berkeley, CA 94720 USA
基金
美国国家卫生研究院;
关键词
ORAL MICROBIOME; INTESTINAL MICROBIOTA; DELIVERY MODE; DIVERSITY; DISEASE; SEQUENCES; WEIGHT; ASSOCIATION; ACQUISITION; OVERWEIGHT;
D O I
10.1038/pr.2016.9
中图分类号
R72 [儿科学];
学科分类号
100202 ;
摘要
BACKGROUND: The childhood salivary microbiome, which plays an important role in healthy development, may be influenced by breast milk consumption. The composition of the milk microbiome and the role it plays in the establishment of the infant microbiome are not well understood. METHODS: Here, we sequenced the bacterial 16S rRNA gene to characterize microbial communities in breast milk and 5-year-old child saliva from 10 low-income, Mexican-American mother-child pairs with a high prevalence of obesity. RESULTS: Members of the genus Streptococcus dominated both milk and salivary microbial communities in most subjects. Staphylococcus was observed predominately in milk samples while Prevotella was more prevalent in child saliva. No statistically significant relationships were observed between maternal and child microbiomes or between child microbiome and BMI. However, prepregnancy BMI was correlated with both lower Streptococcus abundance (r = -0.67) and higher microbial diversity (r = 0.77) in breast milk (P < 0.05 for both). Diversity estimates were notably similar to data from other low-income cohorts or children. CONCLUSION: These findings contribute to the currently limited state of knowledge regarding the breast milk and salivary microbiomes in mother-child pairs and may inform future studies seeking to elucidate the relationship between early-life microbial exposures and pediatric health.
引用
收藏
页码:846 / 854
页数:9
相关论文
共 40 条
[1]   The Human Microbiome Project strategy for comprehensive sampling of the human microbiome and why it matters [J].
Aagaard, Kjersti ;
Petrosino, Joseph ;
Keitel, Wendy ;
Watson, Mark ;
Katancik, James ;
Garcia, Nathalia ;
Patel, Shital ;
Cutting, Mary ;
Madden, Tessa ;
Hamilton, Holli ;
Harris, Emily ;
Gevers, Dirk ;
Simone, Gina ;
McInnes, Pamela ;
Versalovic, James .
FASEB JOURNAL, 2013, 27 (03) :1012-1022
[2]   Childhood overweight after establishment of the gut microbiota: the role of delivery mode, pre-pregnancy weight and early administration of antibiotics [J].
Ajslev, T. A. ;
Andersen, C. S. ;
Gamborg, M. ;
Sorensen, T. I. A. ;
Jess, T. .
INTERNATIONAL JOURNAL OF OBESITY, 2011, 35 (04) :522-529
[3]  
Bokulich NA, 2013, NAT METHODS, V10, P57, DOI [10.1038/NMETH.2276, 10.1038/nmeth.2276]
[4]   The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery [J].
Cabrera-Rubio, Raul ;
Carmen Collado, M. ;
Laitinen, Kirsi ;
Salminen, Seppo ;
Isolauri, Erika ;
Mira, Alex .
AMERICAN JOURNAL OF CLINICAL NUTRITION, 2012, 96 (03) :544-551
[5]   Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms [J].
Caporaso, J. Gregory ;
Lauber, Christian L. ;
Walters, William A. ;
Berg-Lyons, Donna ;
Huntley, James ;
Fierer, Noah ;
Owens, Sarah M. ;
Betley, Jason ;
Fraser, Louise ;
Bauer, Markus ;
Gormley, Niall ;
Gilbert, Jack A. ;
Smith, Geoff ;
Knight, Rob .
ISME JOURNAL, 2012, 6 (08) :1621-1624
[6]   Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample [J].
Caporaso, J. Gregory ;
Lauber, Christian L. ;
Walters, William A. ;
Berg-Lyons, Donna ;
Lozupone, Catherine A. ;
Turnbaugh, Peter J. ;
Fierer, Noah ;
Knight, Rob .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 :4516-4522
[7]   QIIME allows analysis of high-throughput community sequencing data [J].
Caporaso, J. Gregory ;
Kuczynski, Justin ;
Stombaugh, Jesse ;
Bittinger, Kyle ;
Bushman, Frederic D. ;
Costello, Elizabeth K. ;
Fierer, Noah ;
Pena, Antonio Gonzalez ;
Goodrich, Julia K. ;
Gordon, Jeffrey I. ;
Huttley, Gavin A. ;
Kelley, Scott T. ;
Knights, Dan ;
Koenig, Jeremy E. ;
Ley, Ruth E. ;
Lozupone, Catherine A. ;
McDonald, Daniel ;
Muegge, Brian D. ;
Pirrung, Meg ;
Reeder, Jens ;
Sevinsky, Joel R. ;
Tumbaugh, Peter J. ;
Walters, William A. ;
Widmann, Jeremy ;
Yatsunenko, Tanya ;
Zaneveld, Jesse ;
Knight, Rob .
NATURE METHODS, 2010, 7 (05) :335-336
[8]   PyNAST: a flexible tool for aligning sequences to a template alignment [J].
Caporaso, J. Gregory ;
Bittinger, Kyle ;
Bushman, Frederic D. ;
DeSantis, Todd Z. ;
Andersen, Gary L. ;
Knight, Rob .
BIOINFORMATICS, 2010, 26 (02) :266-267
[9]   Effect of mother's weight on infant's microbiota acquisition, composition, and activity during early infancy a prospective follow-up study initiated in early pregnancy [J].
Carmen Collado, Maria ;
Isolauri, Erika ;
Laitinen, Kirsi ;
Salminen, Seppo .
AMERICAN JOURNAL OF CLINICAL NUTRITION, 2010, 92 (05) :1023-1030
[10]   Comparative Analysis of Salivary Bacterial Microbiome Diversity in Edentulous Infants and Their Mothers or Primary Care Givers Using Pyrosequencing [J].
Cephas, Kimberly D. ;
Kim, Juhee ;
Mathai, Rose Ann ;
Barry, Kathleen A. ;
Dowd, Scot E. ;
Meline, Brandon S. ;
Swanson, Kelly S. .
PLOS ONE, 2011, 6 (08)