The crystal structure of UUCG tetraloop

被引:135
作者
Ennifar, E
Nikulin, A
Tishchenko, S
Serganov, A
Nevskaya, N
Garber, M
Ehresmann, B
Ehresmann, C
Nikonov, S
Dumas, P
机构
[1] Inst Biol Mol & Cellulaire, CNRS, UPR 9002, F-67084 Strasbourg, France
[2] Russian Acad Sci, Inst Prot Res, Pushchino 142292, Moscow Region, Russia
基金
俄罗斯基础研究基金会;
关键词
tetraloop; RNA; X-ray; crystal structure; MAD;
D O I
10.1006/jmbi.2000.4204
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
All large structured RNAs contain hairpin motifs made of a stem closed by several looped nucleotides. The most frequent loop motif is the UUCG one. This motif belongs to the,tetraloop family and has the peculiarity of being highly thermodynamically stable. Here, we report the first crystal structure of two UUCG tetraloops embedded in a larger RNA-protein complex solved at 2.8 Angstrom resolution. The two loops present in the asymmetric unit are in a different crystal packing environment but, nevertheless, have an identical conformation. The observed structure is globally close to that obtained in solution by nuclear magnetic resonance. However, subtle differences point to a more detailed picture of the role played by 2'-hydroxyl groups in stabilising this tetraloop. (C) 2000 Academic Press.
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页码:35 / 42
页数:8
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