Structural and genetic characterization of enterohemorrhagic Escherichia coli O145O antigen and development of an O145 serogroup-specific PCR assay

被引:60
作者
Feng, L
Senchenkova, SN
Tao, J
Shashkov, AS
Liu, B
Shevelev, SD
Reeves, PR
Xu, JG
Knirel, YA
Wang, L
机构
[1] Nankai Univ, TEDA Coll, Sch Biol Sci & Biotechnol, Tianjin 300457, Peoples R China
[2] Nankai Univ, TEDA Coll, Tianjin State Lab Microbiol Funct Genomics, Tianjin 300457, Peoples R China
[3] TEDA, Tianjin Biochip Corp, Tianjin, Peoples R China
[4] Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, Beijing, Peoples R China
[5] Russian Acad Sci, ND Zelinskii Organ Chem Inst, Moscow, Russia
[6] Univ Sydney, Sch Mol & Microbial Biosci, Sydney, NSW 2006, Australia
关键词
D O I
10.1128/JB.187.2.758-764.2005
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Enterohemorrhagic Escherichia coli O145 strains are emerging as causes of hemorrhagic colitis and hemolytic uremic syndrome. In this study, we present the structure of the E. coli O145 O antigen and the sequence of its gene cluster. The O145 antigen has repeat units containing three monosaccharide residues: 2-acetamido-2-deoxy-D-glucose (GlcNAc), 2-acetamidoylamino-2,6-dideoxy-L-galactose, and N-acetylneuraminic acid. It is very closely related to Salmonella enterica serovar Touera and S. enterica subsp. arizonae O21 antigen. The E. coli O145 gene cluster is located between the JUMPStart sequence and the gnd gene and consists of 15 open reading frames. Putative genes for the synthesis of the O-antigen constituents, for sugar transferase, and for O-antigen processing were annotated based on sequence similarities and the presence of conserved regions. The putative genes located in the E. coli O145 O-antigen gene cluster accounted for all functions expected for synthesis of the structure. An E. coli O145 serogroup-specific PCR assay based on the genes wzx and wzy was also developed by screening E. coli and Shigella isolates of different serotypes.
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页码:758 / 764
页数:7
相关论文
共 64 条
[1]   ROLE OF THE RFE GENE IN THE BIOSYNTHESIS OF THE ESCHERICHIA-COLI O7-SPECIFIC LIPOPOLYSACCHARIDE AND OTHER O-SPECIFIC POLYSACCHARIDES CONTAINING N-ACETYLGLUCOSAMINE [J].
ALEXANDER, DC ;
VALVANO, MA .
JOURNAL OF BACTERIOLOGY, 1994, 176 (22) :7079-7084
[2]   Histidine biosynthetic pathway and genes: Structure, regulation, and evolution [J].
Alifano, P ;
Fani, R ;
Lio, P ;
Lazcano, A ;
Bazzicalupo, M ;
Carlomagno, MS ;
Bruni, CB .
MICROBIOLOGICAL REVIEWS, 1996, 60 (01) :44-+
[3]   PREDICTION OF ANTI AND GAUCHE VICINAL PROTON-PROTON COUPLING-CONSTANTS IN CARBOHYDRATES - A SIMPLE ADDITIVITY RULE FOR PYRANOSE RINGS [J].
ALTONA, C ;
HAASNOOT, CAG .
ORGANIC MAGNETIC RESONANCE, 1980, 13 (06) :417-429
[4]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[5]   Developing an energy landscape for the novel function of a (β/α)8 barrel:: Ammonia conduction through HisF [J].
Amaro, R ;
Tajkhorshid, E ;
Luthey-Schulten, Z .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (13) :7599-7604
[6]   NUCLEOTIDE-SEQUENCE AND GENETIC-ANALYSIS OF THE NEUD AND NEUB GENES IN REGION-2 OF THE POLYSIALIC ACID GENE-CLUSTER OF ESCHERICHIA-COLI-K1 [J].
ANNUNZIATO, PW ;
WRIGHT, LF ;
VANN, WF ;
SILVER, RP .
JOURNAL OF BACTERIOLOGY, 1995, 177 (02) :312-319
[7]   SEQUENCE AND ANALYSIS OF THE O-ANTIGEN GENE (RFB) CLUSTER OF ESCHERICHIA-COLI-O111 [J].
BASTIN, DA ;
REEVES, PR .
GENE, 1995, 164 (01) :17-23
[8]  
Bateman A, 2004, NUCLEIC ACIDS RES, V32, pD138, DOI [10.1093/nar/gkp985, 10.1093/nar/gkr1065, 10.1093/nar/gkh121]
[9]   Imidazole glycerol phosphate synthase from Thermotoga maritima -: Quaternary structure, steady-state kinetics, and reaction mechanism of the bienzyme complex [J].
Beismann-Driemeyer, S ;
Sterner, R .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (23) :20387-20396
[10]   Human infections with Shiga toxin-producing Escherichia coli other than serogroup O157 in Germany [J].
Beutin, L ;
Zimmermann, S ;
Gleier, K .
EMERGING INFECTIOUS DISEASES, 1998, 4 (04) :635-639