Isolation and characterization of microsatellite loci in the blue manakin, Chiroxiphia caudata (Aves, Pipridae)

被引:8
作者
Francisco, MR
Galetti, PM
Gibbs, L
机构
[1] Univ Fed Sao Carlos, Dept Genet & Evolucao, BR-13565905 Sao Carlos, SP, Brazil
[2] Ohio State Univ, Dept Evolut Ecol & Organismal Biol, Columbus, OH USA
来源
MOLECULAR ECOLOGY NOTES | 2004年 / 4卷 / 04期
关键词
Brazilian Atlantic coast forest; Chiroxiphia caudata; manakins; microsatellites; Pipridae;
D O I
10.1111/j.1471-8286.2004.00812.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We designed primers for amplifying 11 polymorphic microsatellite loci in the blue manakin, Chiroxiphia caudata, a neotropical passerine bird which inhabits a critically endangered tropical ecosystem, the Brazilian Atlantic forest. Based on genotypes from 24 individuals from a single population, we detected between four and 22 alleles per locus with observed heterozygosities ranging from 0.54 to 0.92. These highly variable loci will be useful for determining levels of population differentiation and assessing the impact of habitat fragmentation on levels of genetic variation in isolated populations of these birds. Keywords: Brazilian Atlantic coast forest, Chiroxiphia caudata, manakins, microsatellites, Pipriclae Received 2 June 2004; revision accepted 21 August 2004.
引用
收藏
页码:758 / 760
页数:3
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