Direct observation of the PH-dependent equilibrium between L-like and M intermediates of photoactive yellow protein

被引:19
作者
Imamoto, Y [1 ]
Harigal, M [1 ]
Kataoka, M [1 ]
机构
[1] Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300192, Japan
关键词
photoreaction cycle; intermediate; PAS domain; conformational change; pH titration;
D O I
10.1016/j.febslet.2004.09.065
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Equilibrium between the photoproducts of photoactive yellow protein (PYP), present in a millisecond time scale, was studied. The near-UV intermediate of PYP (PYPM) was red-shifted by alkalization due to the deprotonation of the chromophore (pK(a) = 10.2). In addition, a small amount of red-shifted intermediate coexisted with PYPM. Its spectral shape in the visible region agreed with that Of PYPL, the precursor of PYPM. The fraction Of PYPL-like product was maximal at pH 10. It decays with a rate constant identical to that of PYPM. These results indicate that PYPL-like product is in pH-dependent equilibrium with PYPM and deprotonated PYPM. (C) 2004 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:75 / 80
页数:6
相关论文
共 26 条
[1]   1.4 ANGSTROM STRUCTURE OF PHOTOACTIVE YELLOW PROTEIN, A CYTOSOLIC PHOTORECEPTOR - UNUSUAL FOLD, ACTIVE-SITE, AND CHROMOPHORE [J].
BORGSTAHL, GEO ;
WILLIAMS, DR ;
GETZOFF, ED .
BIOCHEMISTRY, 1995, 34 (19) :6278-6287
[2]   pH dependence of the photocycle kinetics of the E46Q mutant of photoactive yellow protein:: Protonation equilibrium between I1 and I2 intermediates, chromophore deprotonation by hydroxyl uptake, and protonation relaxation of the dark state [J].
Borucki, B ;
Otto, H ;
Joshi, CP ;
Gasperi, C ;
Cusanovich, MA ;
Devanathan, S ;
Tollin, G ;
Heyn, MP .
BIOCHEMISTRY, 2003, 42 (29) :8780-8790
[3]   Structure of the I1 early intermediate of photoactive yellow protein by FTIR spectroscopy [J].
Brudler, R ;
Rammelsberg, R ;
Woo, TT ;
Getzoff, ED ;
Gerwert, K .
NATURE STRUCTURAL BIOLOGY, 2001, 8 (03) :265-270
[4]   Active site mutants implicate key residues for control of color and light cycle kinetics of photoactive yellow protein [J].
Genick, UK ;
Devanathan, S ;
Meyer, TE ;
Canestrelli, IL ;
Williams, E ;
Cusanovich, MA ;
Tollin, G ;
Getzoff, ED .
BIOCHEMISTRY, 1997, 36 (01) :8-14
[5]   Amino acids in the N-terminal region regulate the photocycle of photoactive yellow protein [J].
Harigai, M ;
Yasuda, S ;
Imamoto, Y ;
Yoshihara, F ;
Tokunaga, F ;
Kataoka, M .
JOURNAL OF BIOCHEMISTRY, 2001, 130 (01) :51-56
[6]   Protonation deprotonation reactions triggered by photoactivation of photoactive yellow protein from Ectothiorhodospira halophila [J].
Hendriks, J ;
Hoff, WD ;
Crielaard, W ;
Hellingwerf, KJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (25) :17655-17660
[7]   Deuterium isotope effects in the photocycle transitions of the photoactive yellow protein [J].
Hendriks, J ;
van Stokkum, IHM ;
Hellingwerf, KJ .
BIOPHYSICAL JOURNAL, 2003, 84 (02) :1180-1191
[8]   MEASUREMENT AND GLOBAL ANALYSIS OF THE ABSORBENCY CHANGES IN THE PHOTOCYCLE OF THE PHOTOACTIVE YELLOW PROTEIN FROM ECTOTHIORHODOSPIRA-HALOPHILA [J].
HOFF, WD ;
VANSTOKKUM, IHM ;
VANRAMESDONK, HJ ;
VANBREDERODE, ME ;
BROUWER, AM ;
FITCH, JC ;
MEYER, TE ;
VANGRONDELLE, R ;
HELLINGWERF, KJ .
BIOPHYSICAL JOURNAL, 1994, 67 (04) :1691-1705
[9]   RECONSTITUTION PHOTOACTIVE YELLOW PROTEIN FROM APOPROTEIN AND P-COUMARIC ACID-DERIVATIVES [J].
IMAMOTO, Y ;
ITO, T ;
KATAOKA, M ;
TOKUNAGA, F .
FEBS LETTERS, 1995, 374 (02) :157-160
[10]   Evidence for proton transfer from Glu-46 to the chromophore during the photocycle of photoactive yellow protein [J].
Imamoto, Y ;
Mihara, K ;
Hisatomi, O ;
Kataoka, M ;
Tokunaga, F ;
Bojkova, N ;
Yoshihara, K .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (20) :12905-12908