共 26 条
Direct observation of the PH-dependent equilibrium between L-like and M intermediates of photoactive yellow protein
被引:19
作者:

Imamoto, Y
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机构:
Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300192, Japan Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300192, Japan

Harigal, M
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Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300192, Japan Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300192, Japan

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机构:
[1] Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300192, Japan
关键词:
photoreaction cycle;
intermediate;
PAS domain;
conformational change;
pH titration;
D O I:
10.1016/j.febslet.2004.09.065
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Equilibrium between the photoproducts of photoactive yellow protein (PYP), present in a millisecond time scale, was studied. The near-UV intermediate of PYP (PYPM) was red-shifted by alkalization due to the deprotonation of the chromophore (pK(a) = 10.2). In addition, a small amount of red-shifted intermediate coexisted with PYPM. Its spectral shape in the visible region agreed with that Of PYPL, the precursor of PYPM. The fraction Of PYPL-like product was maximal at pH 10. It decays with a rate constant identical to that of PYPM. These results indicate that PYPL-like product is in pH-dependent equilibrium with PYPM and deprotonated PYPM. (C) 2004 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
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页码:75 / 80
页数:6
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共 26 条
[1]
1.4 ANGSTROM STRUCTURE OF PHOTOACTIVE YELLOW PROTEIN, A CYTOSOLIC PHOTORECEPTOR - UNUSUAL FOLD, ACTIVE-SITE, AND CHROMOPHORE
[J].
BORGSTAHL, GEO
;
WILLIAMS, DR
;
GETZOFF, ED
.
BIOCHEMISTRY,
1995, 34 (19)
:6278-6287

BORGSTAHL, GEO
论文数: 0 引用数: 0
h-index: 0
机构:
SCRIPPS RES INST, DEPT MOLEC BIOL, LA JOLLA, CA 92037 USA SCRIPPS RES INST, DEPT MOLEC BIOL, LA JOLLA, CA 92037 USA

WILLIAMS, DR
论文数: 0 引用数: 0
h-index: 0
机构:
SCRIPPS RES INST, DEPT MOLEC BIOL, LA JOLLA, CA 92037 USA SCRIPPS RES INST, DEPT MOLEC BIOL, LA JOLLA, CA 92037 USA

GETZOFF, ED
论文数: 0 引用数: 0
h-index: 0
机构:
SCRIPPS RES INST, DEPT MOLEC BIOL, LA JOLLA, CA 92037 USA SCRIPPS RES INST, DEPT MOLEC BIOL, LA JOLLA, CA 92037 USA
[2]
pH dependence of the photocycle kinetics of the E46Q mutant of photoactive yellow protein:: Protonation equilibrium between I1 and I2 intermediates, chromophore deprotonation by hydroxyl uptake, and protonation relaxation of the dark state
[J].
Borucki, B
;
Otto, H
;
Joshi, CP
;
Gasperi, C
;
Cusanovich, MA
;
Devanathan, S
;
Tollin, G
;
Heyn, MP
.
BIOCHEMISTRY,
2003, 42 (29)
:8780-8790

Borucki, B
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany

Otto, H
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany

Joshi, CP
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany

Gasperi, C
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany

Cusanovich, MA
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany

Devanathan, S
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany

Tollin, G
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany

Heyn, MP
论文数: 0 引用数: 0
h-index: 0
机构: Free Univ Berlin, Dept Phys, Biophys Grp, D-14195 Berlin, Germany
[3]
Structure of the I1 early intermediate of photoactive yellow protein by FTIR spectroscopy
[J].
Brudler, R
;
Rammelsberg, R
;
Woo, TT
;
Getzoff, ED
;
Gerwert, K
.
NATURE STRUCTURAL BIOLOGY,
2001, 8 (03)
:265-270

Brudler, R
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA

Rammelsberg, R
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA

Woo, TT
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA

Getzoff, ED
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA

Gerwert, K
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
[4]
Active site mutants implicate key residues for control of color and light cycle kinetics of photoactive yellow protein
[J].
Genick, UK
;
Devanathan, S
;
Meyer, TE
;
Canestrelli, IL
;
Williams, E
;
Cusanovich, MA
;
Tollin, G
;
Getzoff, ED
.
BIOCHEMISTRY,
1997, 36 (01)
:8-14

Genick, UK
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA

Devanathan, S
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA

Meyer, TE
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA

Canestrelli, IL
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA

Williams, E
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA

Cusanovich, MA
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA

Tollin, G
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA

Getzoff, ED
论文数: 0 引用数: 0
h-index: 0
机构: Scripps Res Inst, DEPT MOL BIOL, LA JOLLA, CA 92037 USA
[5]
Amino acids in the N-terminal region regulate the photocycle of photoactive yellow protein
[J].
Harigai, M
;
Yasuda, S
;
Imamoto, Y
;
Yoshihara, F
;
Tokunaga, F
;
Kataoka, M
.
JOURNAL OF BIOCHEMISTRY,
2001, 130 (01)
:51-56

Harigai, M
论文数: 0 引用数: 0
h-index: 0
机构: Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300101, Japan

论文数: 引用数:
h-index:
机构:

Imamoto, Y
论文数: 0 引用数: 0
h-index: 0
机构:
Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300101, Japan Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300101, Japan

Yoshihara, F
论文数: 0 引用数: 0
h-index: 0
机构: Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300101, Japan

Tokunaga, F
论文数: 0 引用数: 0
h-index: 0
机构: Nara Inst Sci & Technol, Grad Sch Mat Sci, Nara 6300101, Japan

论文数: 引用数:
h-index:
机构:
[6]
Protonation deprotonation reactions triggered by photoactivation of photoactive yellow protein from Ectothiorhodospira halophila
[J].
Hendriks, J
;
Hoff, WD
;
Crielaard, W
;
Hellingwerf, KJ
.
JOURNAL OF BIOLOGICAL CHEMISTRY,
1999, 274 (25)
:17655-17660

Hendriks, J
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands

Hoff, WD
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands

Crielaard, W
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands

Hellingwerf, KJ
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands Univ Amsterdam, Microbiol Lab, EC Slater Inst, Bioctr, NL-1018 WS Amsterdam, Netherlands
[7]
Deuterium isotope effects in the photocycle transitions of the photoactive yellow protein
[J].
Hendriks, J
;
van Stokkum, IHM
;
Hellingwerf, KJ
.
BIOPHYSICAL JOURNAL,
2003, 84 (02)
:1180-1191

Hendriks, J
论文数: 0 引用数: 0
h-index: 0
机构: Univ Amsterdam, BioCentrum, Swammerdam Inst Life Sci, Microbiol Lab,SILS, NL-1018 WV Amsterdam, Netherlands

van Stokkum, IHM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Amsterdam, BioCentrum, Swammerdam Inst Life Sci, Microbiol Lab,SILS, NL-1018 WV Amsterdam, Netherlands

论文数: 引用数:
h-index:
机构:
[8]
MEASUREMENT AND GLOBAL ANALYSIS OF THE ABSORBENCY CHANGES IN THE PHOTOCYCLE OF THE PHOTOACTIVE YELLOW PROTEIN FROM ECTOTHIORHODOSPIRA-HALOPHILA
[J].
HOFF, WD
;
VANSTOKKUM, IHM
;
VANRAMESDONK, HJ
;
VANBREDERODE, ME
;
BROUWER, AM
;
FITCH, JC
;
MEYER, TE
;
VANGRONDELLE, R
;
HELLINGWERF, KJ
.
BIOPHYSICAL JOURNAL,
1994, 67 (04)
:1691-1705

HOFF, WD
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS

VANSTOKKUM, IHM
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS

VANRAMESDONK, HJ
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS

VANBREDERODE, ME
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS

论文数: 引用数:
h-index:
机构:

FITCH, JC
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS

MEYER, TE
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS

VANGRONDELLE, R
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS

HELLINGWERF, KJ
论文数: 0 引用数: 0
h-index: 0
机构: UNIV AMSTERDAM,BIOCTR AMSTERDAM,EC SLATER INST BIOCHEM RES,DEPT MICROBIOL,1018 WS AMSTERDAM,NETHERLANDS
[9]
RECONSTITUTION PHOTOACTIVE YELLOW PROTEIN FROM APOPROTEIN AND P-COUMARIC ACID-DERIVATIVES
[J].
IMAMOTO, Y
;
ITO, T
;
KATAOKA, M
;
TOKUNAGA, F
.
FEBS LETTERS,
1995, 374 (02)
:157-160

IMAMOTO, Y
论文数: 0 引用数: 0
h-index: 0
机构:
OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

ITO, T
论文数: 0 引用数: 0
h-index: 0
机构:
OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

KATAOKA, M
论文数: 0 引用数: 0
h-index: 0
机构:
OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

TOKUNAGA, F
论文数: 0 引用数: 0
h-index: 0
机构:
OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN OSAKA UNIV,FAC SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN
[10]
Evidence for proton transfer from Glu-46 to the chromophore during the photocycle of photoactive yellow protein
[J].
Imamoto, Y
;
Mihara, K
;
Hisatomi, O
;
Kataoka, M
;
Tokunaga, F
;
Bojkova, N
;
Yoshihara, K
.
JOURNAL OF BIOLOGICAL CHEMISTRY,
1997, 272 (20)
:12905-12908

Imamoto, Y
论文数: 0 引用数: 0
h-index: 0
机构: OSAKA UNIV,GRAD SCH SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

Mihara, K
论文数: 0 引用数: 0
h-index: 0
机构: OSAKA UNIV,GRAD SCH SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

Hisatomi, O
论文数: 0 引用数: 0
h-index: 0
机构: OSAKA UNIV,GRAD SCH SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

Kataoka, M
论文数: 0 引用数: 0
h-index: 0
机构: OSAKA UNIV,GRAD SCH SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

Tokunaga, F
论文数: 0 引用数: 0
h-index: 0
机构: OSAKA UNIV,GRAD SCH SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

Bojkova, N
论文数: 0 引用数: 0
h-index: 0
机构: OSAKA UNIV,GRAD SCH SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN

Yoshihara, K
论文数: 0 引用数: 0
h-index: 0
机构: OSAKA UNIV,GRAD SCH SCI,DEPT EARTH & SPACE SCI,TOYONAKA,OSAKA 560,JAPAN