Vegetation Affects the Relative Abundances of Dominant Soil Bacterial Taxa and Soil Respiration Rates in an Upland Grassland Soil

被引:116
作者
Thomson, Bruce C. [1 ]
Ostle, Nick [2 ]
McNamara, Niall [2 ]
Bailey, Mark J. [1 ]
Whiteley, Andrew S. [1 ]
Griffiths, Robert I. [1 ]
机构
[1] Ctr Ecol & Hydrol, Oxford OX1 3SR, England
[2] Lancaster Environm Ctr, Ctr Ecol & Hydrol, Lancaster LA1 4AP, England
关键词
16S RIBOSOMAL-RNA; GRADIENT GEL-ELECTROPHORESIS; COMMUNITY COMPOSITION; MICROBIAL COMMUNITY; BULK SOIL; DIVERSITY; RHIZOSPHERE; MICROORGANISMS; CULTIVATION; CULTURE;
D O I
10.1007/s00248-009-9575-z
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Plant-derived organic matter inputs are thought to be a key driver of soil bacterial community composition and associated soil processes. We sought to investigate the role of acid grassland vegetation on soil bacterial community structure by assessing bacterial diversity in combination with other soil variables in temporally and spatially distinct samples taken from a field-based plant removal experiment. Removal of aboveground vegetation resulted in reproducible differences in soil properties, soil respiration and bacterial diversity. Vegetated soils had significantly increased carbon and nitrogen concentrations and exhibited higher rates of respiration. Molecular analyses revealed that the soils were broadly dominated by Alphaproteobacterial and Acidobacterial lineages, with increased abundances of Alphaproteobacteria in vegetated soils and more Acidobacteria in bare soils. This field-based study contributes to a growing body of evidence documenting the effect of soil nutrient status on the relative abundances of dominant soil bacterial taxa, with Proteobacterial taxa dominating over Acidobacteria in soils exhibiting higher rates of C turnover. Furthermore, we highlight the role of aboveground vegetation in mediating this effect by demonstrating that plant removal can alter the relative abundances of dominant soil taxa with concomitant changes in soil CO2-C efflux.
引用
收藏
页码:335 / 343
页数:9
相关论文
共 42 条
[1]   QUANTIFICATION OF BACTERIAL AND FUNGAL CONTRIBUTIONS TO SOIL RESPIRATION [J].
ANDERSON, JP ;
DOMSCH, KH .
ARCHIV FUR MIKROBIOLOGIE, 1973, 93 (02) :113-127
[2]  
Axelrood PE, 2002, CAN J MICROBIOL, V48, P655, DOI [10.1139/w02-059, 10.1139/W02-059]
[3]  
Bardgett R.D, 2005, BIOL SOIL COMMUNITY, P57
[4]   Impact of growth stage on the bacterial community structure along maize roots, as determined by metabolic and genetic fingerprinting [J].
Baudoin, E ;
Benizri, E ;
Guckert, A .
APPLIED SOIL ECOLOGY, 2002, 19 (02) :135-145
[5]   NONPARAMETRIC MULTIVARIATE ANALYSES OF CHANGES IN COMMUNITY STRUCTURE [J].
CLARKE, KR .
AUSTRALIAN JOURNAL OF ECOLOGY, 1993, 18 (01) :117-143
[6]   Rhizosphere bacterial community composition in natural stands of Carex arenaria (sand sedge) is determined by bulk soil community composition [J].
de Ridder-Duine, AS ;
Kowalchuk, GA ;
Gunnewiek, PJAK ;
Smant, W ;
van Veen, JA ;
de Boer, W .
SOIL BIOLOGY & BIOCHEMISTRY, 2005, 37 (02) :349-357
[7]   Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB [J].
DeSantis, T. Z. ;
Hugenholtz, P. ;
Larsen, N. ;
Rojas, M. ;
Brodie, E. L. ;
Keller, K. ;
Huber, T. ;
Dalevi, D. ;
Hu, P. ;
Andersen, G. L. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (07) :5069-5072
[8]   NODULATION OF ACACIA SPECIES BY FAST-GROWING AND SLOW-GROWING TROPICAL STRAINS OF RHIZOBIUM [J].
DREYFUS, BL ;
DOMMERGUES, YR .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1981, 41 (01) :97-99
[9]   Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA [J].
Duineveld, BM ;
Kowalchuk, GA ;
Keijzer, A ;
van Elsas, JD ;
van Veen, JA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (01) :172-178
[10]   Elevated CO2 effects on peatland plant community carbon dynamics and DOC production [J].
Fenner, Nathalie ;
Ostle, Nicholas J. ;
McNamara, Niall ;
Sparks, Timothy ;
Harmens, Harry ;
Reynolds, Brian ;
Freeman, Christopher .
ECOSYSTEMS, 2007, 10 (04) :635-647