Host genes associated with HIV/AIDS: advances in gene discovery

被引:80
作者
An, Ping [1 ]
Winkler, Cheryl A. [1 ]
机构
[1] NCI, Lab Genom Divers, SAIC Frederick Inc, Frederick, MD 21702 USA
基金
美国国家卫生研究院;
关键词
IMMUNODEFICIENCY-VIRUS TYPE-1; HIV-1 DISEASE PROGRESSION; DUFFY ANTIGEN RECEPTOR; NUMBER VARIANT ASSAYS; T-CELL COUNTS; AIDS PROGRESSION; AFRICAN-AMERICANS; PROMOTER VARIANT; GENOMEWIDE ASSOCIATION; ANTIRETROVIRAL THERAPY;
D O I
10.1016/j.tig.2010.01.002
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Twenty-five years after the discovery of HIV as the cause of AIDS there is still no effective vaccine and no cure for this disease. HIV susceptibility shows a substantial degree of individual heterogeneity, much of which can be conferred by host genetic variation. In an effort to discover host factors required for HIV replication, identify crucial pathogenic pathways, and reveal the full armament of host defenses, there has been a shift from candidate-gene studies to unbiased genome-wide genetic and functional studies. However, the number of securely identified host factors involved in HIV disease remains small, explaining only similar to 15-20% of the observed heterogeneity - most of which is attributable to human lymphocyte antigen (HLA) variants. Multidisciplinary approaches integrating genetic epidemiology to systems biology will be required to fully understand virus-host interactions to effectively combat HIV/AIDS.
引用
收藏
页码:119 / 131
页数:13
相关论文
共 107 条
[1]   Distribution and effects of polymorphic RANTES gene alleles in HIV/HCV coinfection - A prospective cross-sectional study [J].
Ahlenstiel, Golo ;
Iwan, Agathe ;
Nattermann, Jacob ;
Bueren, Karin ;
Rockstroh, Juergen K. ;
Brackmann, Hans H. ;
Kupfer, Bernd ;
Landt, Olfert ;
Peled, Amnon ;
Sauerbruch, Tilman ;
Spengler, Ulrich ;
Woitas, Rainer P. .
WORLD JOURNAL OF GASTROENTEROLOGY, 2005, 11 (48) :7631-7638
[2]   APOBEC3G genetic variants and their influence on the progression to AIDS [J].
An, P ;
Bleiber, G ;
Duggal, P ;
Nelson, G ;
May, M ;
Mangeat, B ;
Alobwede, I ;
Trono, D ;
Vlahov, D ;
Donfield, S ;
Goedert, JJ ;
Phair, J ;
Buchbinder, S ;
O'Brien, SJ ;
Telenti, A ;
Winkler, CA .
JOURNAL OF VIROLOGY, 2004, 78 (20) :11070-11076
[3]   Influence of CCR5 promoter haplotypes on AIDS progression in African-Americans [J].
An, P ;
Martin, MP ;
Nelson, GW ;
Carrington, M ;
Smith, MW ;
Gong, K ;
Vlahov, D ;
O'Brien, SJ ;
Winkler, CA .
AIDS, 2000, 14 (14) :2117-2122
[4]   A tumor necrosis factor-α-inducible promoter variant of interferon-γ accelerates CD4+ T cell depletion in human immunodeficiency virus-1-infected individuals [J].
An, P ;
Vlahov, D ;
Margolick, JB ;
Phair, J ;
O'Brien, TR ;
Lautenberger, J ;
O'Brien, SJ ;
Winkler, CA .
JOURNAL OF INFECTIOUS DISEASES, 2003, 188 (02) :228-231
[5]   Modulating influence on HIV/AIDS by interacting RANTES gene variants [J].
An, P ;
Nelson, GW ;
Wang, LH ;
Donfield, S ;
Goedert, JJ ;
Phair, J ;
Vlahov, D ;
Buchbinder, S ;
Farrar, WL ;
Modi, W ;
O'Brien, SJ ;
Winkler, CA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (15) :10002-10007
[6]   Regulatory polymorphisms in the cyclophilin A gene, PPIA, accelerate progression to AIDS [J].
An, Ping ;
Wang, Li Hua ;
Hutcheson-Dilks, Holli ;
Nelson, George ;
Donfield, Sharyne ;
Goedert, James J. ;
Rinaldo, Charles R. ;
Buchbinder, Susan ;
Kirk, Gregory D. ;
O'Brien, Stephen J. ;
Winkler, Cheryl A. .
PLOS PATHOGENS, 2007, 3 (06) :849-857
[7]   Polymorphisms of CUL5 are associated with CD4+ T cell loss in HIV-1 infected individuals [J].
An, Ping ;
Duggal, Priya ;
Wang, Li Hua ;
O'Brien, Stephen J. ;
Donfield, Sharyne ;
Goedert, James J. ;
Phair, John ;
Buchbinder, Susan ;
Kirk, Gregory D. ;
Winkler, Cheryl A. .
PLOS GENETICS, 2007, 3 (01) :0123-0132
[8]   APOBEC3B Deletion and Risk of HIV-1 Acquisition [J].
An, Ping ;
Johnson, Randall ;
Phair, John ;
Kirk, Gregory D. ;
Yu, Xiao-Fang ;
Donfield, Sharyne ;
Buchbinder, Susan ;
Goedert, James J. ;
Winkler, Cheryl A. .
JOURNAL OF INFECTIOUS DISEASES, 2009, 200 (07) :1054-1058
[9]   Polymorphisms in IRF-1 associated with resistance to HIV-1 infection in highly exposed uninfected Kenyan sex workers [J].
Ball, Terry Blake ;
Ji, Hezhao ;
Kimani, Joshua ;
McLaren, Paul ;
Marlin, Crystal ;
Hill, Adrian V. S. ;
Plummer, Francis Allan .
AIDS, 2007, 21 (09) :1091-1101
[10]   Consistent effects of TSG101 genetic variability on multiple outcomes of exposure to human immunodeficiency virus type 1 [J].
Bashirova, Arman A. ;
Bleiber, Gabriela ;
Qi, Ying ;
Hutcheson, Holli ;
Yamashita, Traci ;
Johnson, Randall C. ;
Cheng, Jie ;
Alter, Galit ;
Goedert, James J. ;
Buchbinder, Susan ;
Hoots, Keith ;
Vlahov, David ;
May, Margaret ;
Maldarelli, Frank ;
Jacobson, Lisa ;
O'Brien, Stephen J. ;
Telenti, Amalio ;
Carrington, Mary .
JOURNAL OF VIROLOGY, 2006, 80 (14) :6757-6763