Importing MAGE-ML format microarray data into BioConductor

被引:7
作者
Durinck, S
Allemeersch, J
Carey, VJ
Moreau, Y
De Moor, B
机构
[1] Katholieke Univ Leuven, ESAT SCD, Dept Elect Engn, B-3001 Louvain, Belgium
[2] Brigham & Womens Hosp, Channing Lab, Boston, MA 02115 USA
关键词
D O I
10.1093/bioinformatics/bth396
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The microarray gene expression markup language (MAGE-ML) is a widely used XML (eXtensible Markup Language) standard for describing and exchanging information about microarray experiments. It can describe microarray designs, microarray experiment designs, gene expression data and data analysis results. We describe RMAGEML, a new Bioconductor package that provides a link between cDNA microarray data stored in MAGE-ML format and the Bioconductor framework for preprocessing, visualization and analysis of microarray experiments.
引用
收藏
页码:3641 / 3642
页数:2
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