Genetic variability of grey snow mould (Typhula incarnata)

被引:7
作者
Vergara, GV
Bughrara, SS
Jung, G
机构
[1] Michigan State Univ, Dept Crop & Soil Sci, E Lansing, MI 48824 USA
[2] Univ Wisconsin, Dept Plant Pathol, Madison, WI 53706 USA
来源
MYCOLOGICAL RESEARCH | 2004年 / 108卷
关键词
D O I
10.1017/S0953756204001078
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Randomly amplified polymorphic DNA (RAPD) markers were used to assess the genetic diversity of isolates of grey snow mould ('gray snow mold'), Typhida incarnata, taken from infected turfgrasses from 40 different locations in the northern USA. Data from 115 markers using 37 RAPD primers showed 48% polymorphism. The distance coefficients between isolates indicate the wide genetic diversity of T. incarnata across the sample area. Dendrograms generated using neighbour-joining (NJ) bootstrap analyses showed three clades and suggest possible recent colonization from common founder groups. Partitioning of the genetic variance using analysis of molecular variance (AMOVA) of four groups based on geographic locations (Michigan, lower and upper peninsula; Minnesota; Wisconsin) showed that genetic variation attributable among groups and within groups was 12.67 and 87.33%, respectively. No correlation was found between geographic distance and pairwise genetic distance of the groups. High outcrossing and sexual recombination of T. incarnata may well be key factors explaining the genetic variability as shown with the low Fixation index (FST) and high average of genetic diversity per locus within groups.
引用
收藏
页码:1283 / 1290
页数:8
相关论文
共 25 条
[1]  
[Anonymous], 2000, ARLEQUIN SOFTWARE PO
[2]   Isozyme and RAPD studies in Prosopis glandulosa and P-velutina (Leguminosae, Mimosoideae) [J].
Bessega, C ;
Saidman, BO ;
Vilardi, JC .
GENETICS AND MOLECULAR BIOLOGY, 2000, 23 (03) :639-648
[3]   INCOMPATIBILITY ALLELES OF TYPHULA INCARNATA [J].
BRUEHL, GW ;
MACHTMES, R .
PHYTOPATHOLOGY, 1978, 68 (09) :1311-1313
[4]  
Efron B., 1994, INTRO BOOTSTRAP, DOI DOI 10.1201/9780429246593
[5]   USE OF RANDOM AMPLIFIED POLYMORPHIC DNA (RAPD) TO CHARACTERIZE RACE 2 OF FUSARIUM-OXYSPORUM F SP PISI [J].
GRAJALMARTIN, MJ ;
SIMON, CJ ;
MUEHLBAUER, FJ .
PHYTOPATHOLOGY, 1993, 83 (06) :612-614
[6]   Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with the freeware program FreeTree:: application to trichomonad parasites [J].
Hampl, V ;
Pavlícek, A ;
Flegr, J .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :731-735
[7]   Genetic relationships of pathogenic Typhula species assessed by RAPD, ITS-RFLP and ITS sequencing [J].
Hsiang, T ;
Wu, CR .
MYCOLOGICAL RESEARCH, 2000, 104 :16-22
[8]   Biology and management of typhula snow molds of turfgrass [J].
Hsiang, T ;
Matsumoto, N ;
Millett, SM .
PLANT DISEASE, 1999, 83 (09) :788-798
[9]   USE OF RANDOM AMPLIFIED POLYMORPHIC DNA MARKERS FOR THE DETECTION OF GENETIC-VARIATION IN MAGNAPORTHE POAE [J].
HUFF, DR ;
BUNTING, TE ;
PLUMLEY, KA .
PHYTOPATHOLOGY, 1994, 84 (11) :1312-1316
[10]  
JACKSON N, 1969, J SPORTS TURF RES I, V45, P67