PanCGHweb: a web tool for genotype calling in pangenome CGH data

被引：10

作者：

Bayjanov, Jumamurat R. ^{[1
,2
]}

Siezen, Roland J. ^{[1
,2
,3
,4
,5
]}

van Hijum, Sacha A. F. T. ^{[1
,2
,3
,4
,5
]}

机构：

[1] Radboud Univ Nijmegen Med Ctr, Ctr Mol & Biomol Informat, Nijmegen Ctr Mol Life Sci, NL-6500 HB Nijmegen, Netherlands

[2] Netherlands Bioinformat Ctr, NL-6500 HB Nijmegen, Netherlands

[3] TI Food & Nutr, NL-6700 AN Wageningen, Netherlands

[4] NIZO Food Res, NL-6710 BA Ede, Netherlands

[5] Kluyver Ctr Genom Ind Fermentat, NL-2600 GA Delft, Netherlands

来源：

BIOINFORMATICS | 2010年 / 26卷 / 09期

关键词：

PAN-GENOME;

D O I：

10.1093/bioinformatics/btq103

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

A pangenome is the total of genes present in strains of the same species. Pangenome microarrays allow determining the genomic content of bacterial strains more accurately than conventional comparative genome hybridization microarrays. PanCGHweb is the first tool that effectively calls genotype based on pangenome microarray data.

引用

页码：1256 / 1257

页数：2

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