Complexation of Na+ and K+ to aromatic amino acids:: A density functional computational study of cation-π interactions

被引:148
作者
Dunbar, RC [1 ]
机构
[1] Case Western Reserve Univ, Dept Chem, Cleveland, OH 44106 USA
关键词
D O I
10.1021/jp000524l
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Binding energies were calculated for the complexes of Na+ and K+ with phenylalanine (Phe), tyrosine (Tyr), and tryptophane (Trp), along with energies of low-energy conformers of the neutral amino acids. Structures were optimized and energies determined by density functional theory (DFT) with the B3LYP functional, using a basis set of 6-31+g(d) on all, or nearly all, heavy atoms. For all but one cation/ligand system, the most energetically favorable binding geometry was the tridentate N/O/Ring chelate. For K+/Trp, however, the advantage of placing the metal ion over the phenyl region of the indole side chain was dominant, leading to a most favored bidentate O/Ring binding geometry. All of the systems, and particularly the Trp systems, have multiple conformers with stabilities within a few kcal mol(-1) of the most stable. Zwitterion forms of the complexes were not unreasonable, but were less stable than the normal forms by similar to 5 kcal mol(-1). To assess the importance of cation-pi interactions, conformers were examined in which the side chain was rotated out of chelation. This indicated cation-x stabilization energies of similar to 5 kcal mol(-1).
引用
收藏
页码:8067 / 8074
页数:8
相关论文
共 42 条
[1]   An absolute sodium cation affinity scale: Threshold collision-induced dissociation experiments and ab initio theory [J].
Armentrout, PB ;
Rodgers, MT .
JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (11) :2238-2247
[2]   AMINO-AROMATIC INTERACTIONS IN PROTEINS [J].
BURLEY, SK ;
PETSKO, GA .
FEBS LETTERS, 1986, 203 (02) :139-143
[3]   Size selectivity by cation-π interactions:: Solvation of K+ and Na+ by benzene and water [J].
Cabarcos, OM ;
Weinheimer, CJ ;
Lisy, JM .
JOURNAL OF CHEMICAL PHYSICS, 1999, 110 (17) :8429-8435
[4]   Li+, Na+, and K+ binding to the DNA and RNA nucleobases. Bond energies and attachment sites from the dissociation of metal ion-bound heterodimers [J].
Cerda, BA ;
Wesdemiotis, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1996, 118 (47) :11884-11892
[5]   THE RELATIVE COPPER(I) ION AFFINITIES OF AMINO-ACIDS IN THE GAS-PHASE [J].
CERDA, BA ;
WESDEMIOTIS, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (38) :9734-9739
[6]  
COOKS RG, 1994, MASS SPECTROM REV, V13, P287
[7]   Solution- and solid-state evidence for alkali metal cation-π interactions with indole, the side chain of tryptophan [J].
De Wall, SL ;
Meadows, ES ;
Barbour, LJ ;
Gokel, GW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (23) :5613-5614
[8]   Cation-π complexation of potassium cation with the phenolic sidechain of tyrosine [J].
De Wall, SL ;
Barbour, LJ ;
Gokel, GW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (36) :8405-8406
[9]   HUMAN GROWTH-HORMONE AND EXTRACELLULAR DOMAIN OF ITS RECEPTOR - CRYSTAL-STRUCTURE OF THE COMPLEX [J].
DEVOS, AM ;
ULTSCH, M ;
KOSSIAKOFF, AA .
SCIENCE, 1992, 255 (5042) :306-312
[10]   ACETYLCHOLINE BINDING BY A SYNTHETIC RECEPTOR - IMPLICATIONS FOR BIOLOGICAL RECOGNITION [J].
DOUGHERTY, DA ;
STAUFFER, DA .
SCIENCE, 1990, 250 (4987) :1558-1560