Use of a new label 13C=18O in the determination of a structural model of phospholamban in a lipid bilayer.: Spatial restraints resolve the ambiguity arising from interpretations of mutagenesis data

被引:89
作者
Torres, J
Adams, PD
Arkin, IT
机构
[1] Univ Cambridge, Dept Biochem, Cambridge Ctr Mol Recognit, Cambridge CB2 1GA, England
[2] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Berkeley, CA 94720 USA
基金
英国惠康基金; 英国生物技术与生命科学研究理事会;
关键词
phospholamban; ion channel; infrared spectroscopy; molecular dynamics;
D O I
10.1006/jmbi.2000.3885
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A structural model of pentameric phospholamban (Plb) in a lipid bilayer has been derived using a combination of experimental data, obtained from ATR-FTIR site-directed dichroism, and the implementation of the resulting restraints during a molecular dynamics simulation. Plb (residues 24-52) has been synthesised incorporating a new label, 1-C-13=O-18, at residues 42 and 43. We have not only determined the tilt of the helices, 10(+/-6) degrees, but also the relative orientation of the transmembrane segments, with an omega angle of -32(+/-10) degrees for L42. This angle is taken as zero in the direction of the helix tilt. Plb is a simple test case where site-directed dichroism has been applied to resolve the indeterminacy arising from the mutagenesis data available. The results presented point specifically to a single structural model for Plb. (C) 2000 Academic Press.
引用
收藏
页码:677 / 685
页数:9
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