Human DNA ligase I efficiently seals nicks in nucleosomes

被引:75
作者
Chafin, DR [1 ]
Vitolo, JM [1 ]
Henricksen, LA [1 ]
Bambara, RA [1 ]
Hayes, JJ [1 ]
机构
[1] Univ Rochester, Med Ctr, Dept Biochem & Biophys, Rochester, NY 14642 USA
关键词
chromatin; gene regulation; human DNA ligase; nucleosome;
D O I
10.1093/emboj/19.20.5492
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The access to DNA within nucleosomes is greatly restricted for most enzymes and trans-acting factors that bind DNA. We report here that human DNA ligase I, which carries out the final step of Okazaki fragment processing and of many DNA repair pathways, can access DNA that is wrapped about the surface of a nucleosome in vitro and carry out its enzymatic function with high efficiency. In addition, we find that ligase activity is not affected by the binding of linker histone (H1) but is greatly influenced by the disposition of the core histone tail domains. These results suggest that the window of opportunity for human DNA ligase I may extend well beyond the first stages of chromatin reassembly after DNA replication or repair.
引用
收藏
页码:5492 / 5501
页数:10
相关论文
共 52 条
[1]   ASSEMBLY OF SPACED CHROMATIN PROMOTED BY DNA-SYNTHESIS IN EXTRACTS FROM XENOPUS EGGS [J].
ALMOUZNI, G ;
MECHALI, M .
EMBO JOURNAL, 1988, 7 (03) :665-672
[2]   CHROMATIN ASSEMBLY ON REPLICATING DNA INVITRO [J].
ALMOUZNI, G ;
CLARK, DJ ;
MECHALI, M ;
WOLFFE, AP .
NUCLEIC ACIDS RESEARCH, 1990, 18 (19) :5767-5774
[3]   Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites [J].
Anderson, JD ;
Widom, J .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 296 (04) :979-987
[4]  
ANDERSON S, 1979, J BIOL CHEM, V254, P1495
[5]   MATURATION OF NUCLEOSOMAL AND NON-NUCLEOSOMAL COMPONENTS OF NASCENT CHROMATIN - DIFFERENTIAL REQUIREMENTS FOR CONCURRENT PROTEIN-SYNTHESIS [J].
ANNUNZIATO, AT ;
SEALE, RL .
BIOCHEMISTRY, 1982, 21 (22) :5431-5438
[6]   Enzymes and reactions at the eukaryotic DNA replication fork [J].
Bambara, RA ;
Murante, RS ;
Henricksen, LA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (08) :4647-4650
[7]   Chromosomal ARS1 has a single leading strand start site [J].
Bielinsky, AK ;
Gerbi, SA .
MOLECULAR CELL, 1999, 3 (04) :477-486
[8]   PROTEASES AS STRUCTURAL PROBES FOR CHROMATIN - THE DOMAIN-STRUCTURE OF HISTONES [J].
BOHM, L ;
CRANEROBINSON, C .
BIOSCIENCE REPORTS, 1984, 4 (05) :365-386
[9]   Binding of the winged-helix transcription factor HNF3 to a linker histone site on the nucleosome [J].
Cirillo, LA ;
McPherson, CE ;
Bossard, P ;
Stevens, K ;
Cherian, S ;
Shim, EY ;
Clark, KL ;
Burley, SK ;
Zaret, KS .
EMBO JOURNAL, 1998, 17 (01) :244-254
[10]   STRUCTURE OF CHROMATIN AT DEOXYRIBONUCLEIC-ACID REPLICATION FORKS - NUCLEASE HYPERSENSITIVITY RESULTS FROM BOTH PRENUCLEOSOMAL DEOXYRIBONUCLEIC-ACID AND AN IMMATURE CHROMATIN STRUCTURE [J].
CUSICK, ME ;
LEE, KS ;
DEPAMPHILIS, ML ;
WASSARMAN, PM .
BIOCHEMISTRY, 1983, 22 (16) :3873-3884