A multigene approach to phylogenetic analysis using the genus Mycobacterium as a model

被引:203
作者
Devulder, G
de Montclos, MP
Flandrois, JP
机构
[1] Fac Med Lyon Sud, Bacteriol Lab, CNRS, UMR 5558, F-69921 Oullins, France
[2] CHU Lyon Sud, Bacteriol Lab, F-69495 Pierre Benite, France
关键词
D O I
10.1099/ijs.0.63222-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Advances in DNA sequencing and the increasing number of sequences available! in databases have greatly enhanced the bacterial identification process. Several species within the genus Mycobacterium cause serious human and animal diseases. In order to assess their relative positions in the evolutionary process, four gene fragments, from the 16S rRNA (564 bp), hsp65 (420 bp), rpoB (396 bp) and sod (408 bp) genes, were sequenced from 97 strains, including all available type strains of the genus Mycobacterium. The results demonstrate that, in this case, the concatenation of different genes allows significant increases in the power of discrimination and the robustness of the phylogenetic tree. The sequential and/or combined use of sequences of several genes makes it possible to refine the phylogenetic approach and provides a molecular basis for accurate species identification.
引用
收藏
页码:293 / 302
页数:10
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